Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0878 ATGGCCATGGCAACTGTCCATGTTTCTCCCTCCTGCTCAATCTCTTTCTTAAAATCCCATCTCTTTTCTTCTTCTTCTTCGTCCAAACATCTCTCCCACCGCCTTCTACTGCCTCCGAGAATATGCAAATCACGCCCAAAGTATATCGCCCCGCTATCCATCACCGTGAGGATCACCTCCTCCAATGGCTCTCCCCCTCTCATAAATTCTCCGTTTGAGGTTCAGTCTGGTTTGGTGCGAGAAGGGAATTCAGATGGACGTAGGAAAACTAAGATAGTGTGTACAATTGGTCCTTCTACCAGCTCCCCTGAGATGATATGGAAGCTAGCTGAAACTGGAATGAATGTGGCACGTTTGAATATGTCACATGGGGACCATGCATCCCACCAGAAAACCATTGATTTCGTCAAACAATACAATGCCCAATTTCATGACAGGGTTATTGCCATCATGCTTGACACCAAGGGTCCCGAAGTGAGAAGTGGGGACGTACCTCAACCAATTCTACTTAAGGAGGGACAAACATTCAATTTCACCATTAGGAGGGGTGTCTGCACGGAAGACACAGTTAGTGTAAATTATGATGATTTTGTGAATGATGTCGAGGTTGGAGACATACTTCTGGTTGATGGAGGGATGATGTCTCTTGCTGTTAAGTCAAAGACAGAAGACTTGGTTAAATGTGAAGTCGTTGATGGCGGAGAATTGAAATCCAGGCGTCATTTAAATGTCCGTGGGAAAAGTGCAACACTTCCTTCCATAACTGACAAGGATTGGGAAGATATCAAGTTTGGGGTAGACAATAAAGTAGACTTCTATGCTGTATCATTTGTCAAAGATGCTAGAGTAGTTCATGAGTTAAAAGATTACCTCAAAAGTCACAATGCTGATATACATGCGATTGTAAAAATCGAAAGTGCAGATTCCATACCAAATCTTCATTCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGTGGGGACCTTGGAGCTGAACTTCCCATAGAAGAAGTTCCTTTACTGCAGGAGGACATCATTAGAAGGTGTCAGAGTATGCAAAAACCGGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTAATCATCCTACACCAACAAGGGCAGAAGTGTCAGACATTGCAATAGCAGTAAGAGAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCTCATGGAAAATATCCGTTGAAAGCTGTTAAAGTTATGCATTCGGTGGCCCTAAGGACTGAGTCAAGCATTCAGAGTAGTAATGCATATCCAAGAAAATTGGGTGCACATAATAGCCACATGGGAGAAATGTTTGCTTTCCACTCGACAACTATGTCTAACACTCTTAATACTCCTATCATTGTTTTCACCAGAACAGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCCAACTCAACAATCTTTGCATTCACAAATCAAGAACGGATTAAGCAGAGGTTGGCACTTTATCATGGCGTTATGCCCATATTCATGCAATTTTCAAATGATGCGGAGGAGACCTTCTCTAGAGCCATCAAGCTCCTCTTGAGTAAGGGTCATTTACTTGAGGGACAGCATGTTACTCTTGTCCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCTACTCACCACATACAAGTTCGTGAGGTTCATGGATGA 1680 0.4315 MAMATVHVSPSCSISFLKSHLFSSSSSSKHLSHRLLLPPRICKSRPKYIAPLSITVRITSSNGSPPLINSPFEVQSGLVREGNSDGRRKTKIVCTIGPSTSSPEMIWKLAETGMNVARLNMSHGDHASHQKTIDFVKQYNAQFHDRVIAIMLDTKGPEVRSGDVPQPILLKEGQTFNFTIRRGVCTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTEDLVKCEVVDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNKVDFYAVSFVKDARVVHELKDYLKSHNADIHAIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCQSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVREGADAIMLSGETAHGKYPLKAVKVMHSVALRTESSIQSSNAYPRKLGAHNSHMGEMFAFHSTTMSNTLNTPIIVFTRTGSMAILLSHYRPNSTIFAFTNQERIKQRLALYHGVMPIFMQFSNDAEETFSRAIKLLLSKGHLLEGQHVTLVQSGAQPIWREESTHHIQVREVHG* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0878 559 PRINTS Pyruvate kinase family signature 146 162 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 PRINTS Pyruvate kinase family signature 352 376 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 PRINTS Pyruvate kinase family signature 300 326 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 PRINTS Pyruvate kinase family signature 270 284 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 PRINTS Pyruvate kinase family signature 396 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 PRINTS Pyruvate kinase family signature 327 351 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 PRINTS Pyruvate kinase family signature 377 395 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 86 422 IPR015813 GO:0003824
Dod02g0878 559 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 81 557 - -
Dod02g0878 559 Gene3D - 88 418 IPR040442 -
Dod02g0878 559 Gene3D - 419 537 IPR036918 -
Dod02g0878 559 PANTHER PYRUVATE KINASE 81 557 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 Gene3D - 157 252 IPR015806 GO:0004743|GO:0006096
Dod02g0878 559 SUPERFAMILY PK C-terminal domain-like 406 557 IPR036918 -
Dod02g0878 559 Pfam Pyruvate kinase, alpha/beta domain 458 537 IPR015795 -
Dod02g0878 559 SUPERFAMILY PK beta-barrel domain-like 157 248 IPR011037 -
Dod02g0878 559 TIGRFAM pyruv_kin: pyruvate kinase 88 557 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g0878 559 Pfam Pyruvate kinase, barrel domain 88 427 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0878 Dod-Chr2 11287099 11292084 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0878 K00873 - gmx:100776984 848.966