Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0846 ATGAATACACATCCAAATTCAGATGCCAATAAGCGAATTGCGAGAATCGCGTCCCACCTCAACCCCCTCAATCTCAAGGTTGACGATGATGCTTCTTCGTCTTTGTCGCGTGCCAATTGCAGATCTAAAGGTGGCGCGCCGGGATTCAAAGTGGCCATCTTGGGCGCCGCAGGTGGCATAGGACAGCCTCTCTCCATGTTGATGAAGATGAACCCTCTCGTCTCCGTTCTCCACCTATACGACGTCGTCAACACCCCCGGCGTCACCGCTGATATCAGCCACATGGACACCGGCGCCGTCGTTCGGGGATTTTTGGGGCAGAAGCAGCTTGAGGATGCGCTTACAGGAATGGACTTGGTGGTCATTCCTGCTGGTGTTCCCCGAAAACCTGGGATGACGAGAGACGATCTCTTCAATATAAATGCTGGAATTGTGAAAACGCTCTGTGAAGGGATTGCAAAGTGTTGTCCCAAGGCTATTGTCAATGTCATAAGCAATCCTGTTAACTCCACGGTCCCCATTGCTGCTGAGGCTGAAGTTTTGGGTGTTGATCCAAGAGATGTGGATGTCCCTGTCATTGGGGGACATGCAGGAATCACAATTTTACCTCTTCTTTCTCAGGTTAAACCTCCAAGCTCTTTCACCCAGAGAGAAATTGAGTACCTAACAGATCGCATACAAAATGGTGGAACTGAAGTTGTTGAGGCCAAAGCTGGAGCTGGCTCTGCCACATTATCAATGGCATATGCTGCTGTTAAATTTGCAGACGCATGCCTTCGTGCCATGAGAGGAGATGCTGGCGTCATTGAATGTGCATATATTGATTCACAGGTGACTGAACTCCCATACTTTGCATCAAAAGTACGACTCGGTCGTGGTGGGGTTGAGGAAGTTCTTCCTCTTGGTCCCCTGAATGACTATGAGAGGGAAGGTTTGGAAAAGGCCAGGAAAGAGTTAGAAGCAAGCGTGGAGAAGGGTGTTTCTTTCGTCAGAAAATGA 999 0.4925 MNTHPNSDANKRIARIASHLNPLNLKVDDDASSSLSRANCRSKGGAPGFKVAILGAAGGIGQPLSMLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQKQLEDALTGMDLVVIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNVISNPVNSTVPIAAEAEVLGVDPRDVDVPVIGGHAGITILPLLSQVKPPSSFTQREIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRAMRGDAGVIECAYIDSQVTELPYFASKVRLGRGGVEEVLPLGPLNDYEREGLEKARKELEASVEKGVSFVRK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0846 332 Gene3D - 48 178 - -
Dod02g0846 332 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 5 177 - -
Dod02g0846 332 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 178 332 - -
Dod02g0846 332 PANTHER MALATE AND LACTATE DEHYDROGENASE 5 177 - -
Dod02g0846 332 PANTHER MALATE AND LACTATE DEHYDROGENASE 178 332 - -
Dod02g0846 332 Gene3D - 179 332 IPR015955 GO:0003824|GO:0016616
Dod02g0846 332 CDD MDH_glyoxysomal_mitochondrial 49 330 IPR010097 GO:0006099|GO:0030060
Dod02g0846 332 Pfam lactate/malate dehydrogenase, NAD binding domain 50 176 IPR001236 GO:0016491
Dod02g0846 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 178 IPR036291 -
Dod02g0846 332 SUPERFAMILY LDH C-terminal domain-like 178 330 IPR015955 GO:0003824|GO:0016616
Dod02g0846 332 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 178 330 IPR022383 GO:0016616
Dod02g0846 332 PIRSF Lac_mal_DH 48 179 IPR001557 GO:0016616|GO:0019752
Dod02g0846 332 PIRSF Lac_mal_DH 178 328 IPR001557 GO:0016616|GO:0019752
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0846 Dod-Chr2 10842961 10846170 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0846 K00026 - vvi:100260994 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0846 02 10842961 10846170 Dod02g0846 02 10842961 10846170 ECH