Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0822 ATGGAGATACTTTACCAGCCACACGTCGATCGTGAAATCGAATCCCTCATAGAAAGAATACATCCTCCCAGGGTCTGCATAGACAATGATTCTTGCCGAGAATGCACCGTAGTGAAGGTTGATAGTGCAAACAAGCATGGGATATTACTGGAGATGGTCCAGGTGTTGACAGATCTTGATCTCATTATTTCCAAATCATACATTTCCTCCGATGGTGGATGGTTTATGGATGTGTTCCATGTGACCGATCAAGCTGGCAAGAAGCTCGCAGACGAAACCCTCATGCTACACATTCAGCAGGAACTGTGCGTCACTAGAAGAAAAGAAGAGATAATTTCAAGCGACACGTATGGACTACACGTTTACAATGGACCCCATTCACAGCAAAACACGGCCTTGGAGATGACTGGGCTGGACCGACCGGGCCTACTATCAGAGATTGCAGCAGTGCTAGCAGACTTGGGCTGCATCGTCACCTCTGCGATGGCCTGGACCCACAATGACAGAGAGGCCTGCATTATCTACATCGAGGACGCATCCAAGCCGGGGCCCATCAACGACCCAACACGCTTGGCCCACGTTCAAGAGCAGCTGCAGAACGTGGTGAAGGCCCACGGAGACATCGAAGAGAGGAAGAGCGTGAGGCTGACAACATTCGCAGCCGGGCTCACCCACACGGAACGGCGGCTCCACCAGCTGATGTACGCCGACAGGGACTACGAGAGTTGCCGCGCGTGCCACGGGGACAGCAGCGGGGAGCACAAGAAGGGTTGTGATGGGACCCACGTGTCCATTGGTAGATGCAAGGACAAAGGGTACTGGGTCGTGAACGTGAGGAGCAGGGACCGTCCTAAACTGCTGTTTGATACGGTTTGCGTGTTAACAGACATGCAGTATGTGGTGTTTCACGCCGCCATTAGGTCCAAGAGTTCCATGGCTGATCAGGAGTACTACATAAAGCACAACATGAGTAGTTCAAATCTGGACGATGAAAGCGAGAGGCAAAAGCTCATCCTATGCTTAATCGCTGCTATTGAACGCAGAGTCTCGCATGGATTAAGGGTAGACATTCGCACTGAGAATAGAATGGGGCTACTATCGAACGTGACGAGGGTGTTTCGTGAAAATGGACTATCGGTATCAAGGGTTGAGATTGGAACAGAGGGGGAGAAAGCAGTAGGATCGTTTTTCGTTACAGATTCTTCAGGTGGAGAAGTGAACCCGAATATAGCGGAGTTGGTGAGACAAGAGTGTGGTGGATCCGTGGTTACTGATCACAAGTCGCCCTATAGGATTCCTCAATCATCATCATCATCATCGTCGTCGTCAGTTGTTAATGAAACCACAAGCAATATAGTGGCTAGGCCAATATTTTCCTTAGGAAGCATGCTACGGTCTCAGATAGAGCGCCTTTCCGGCAGTTTCGGCCCCATTAGATCTTGA 1443 0.5031 MEILYQPHVDREIESLIERIHPPRVCIDNDSCRECTVVKVDSANKHGILLEMVQVLTDLDLIISKSYISSDGGWFMDVFHVTDQAGKKLADETLMLHIQQELCVTRRKEEIISSDTYGLHVYNGPHSQQNTALEMTGLDRPGLLSEIAAVLADLGCIVTSAMAWTHNDREACIIYIEDASKPGPINDPTRLAHVQEQLQNVVKAHGDIEERKSVRLTTFAAGLTHTERRLHQLMYADRDYESCRACHGDSSGEHKKGCDGTHVSIGRCKDKGYWVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAIRSKSSMADQEYYIKHNMSSSNLDDESERQKLILCLIAAIERRVSHGLRVDIRTENRMGLLSNVTRVFRENGLSVSRVEIGTEGEKAVGSFFVTDSSGGEVNPNIAELVRQECGGSVVTDHKSPYRIPQSSSSSSSSSVVNETTSNIVARPIFSLGSMLRSQIERLSGSFGPIRS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0822 480 SUPERFAMILY ACT-like 32 88 IPR045865 -
Dod02g0822 480 MobiDBLite consensus disorder prediction 428 445 - -
Dod02g0822 480 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR1 4 479 - -
Dod02g0822 480 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 479 IPR040217 -
Dod02g0822 480 MobiDBLite consensus disorder prediction 424 445 - -
Dod02g0822 480 SUPERFAMILY ACT-like 350 412 IPR045865 -
Dod02g0822 480 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Dod02g0822 480 ProSiteProfiles ACT domain profile. 354 431 IPR002912 -
Dod02g0822 480 CDD ACT_ACR_1 35 106 - -
Dod02g0822 480 SUPERFAMILY ACT-like 129 206 IPR045865 -
Dod02g0822 480 ProSiteProfiles ACT domain profile. 132 213 IPR002912 -
Dod02g0822 480 Pfam ACT domain 132 171 IPR002912 -
Dod02g0822 480 Pfam ACT domain 357 418 IPR002912 -
Dod02g0822 480 Gene3D - 129 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0822 Dod-Chr2 10593838 10598224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0822 - - adu:107487637 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0822 02 10593838 10598224 Dod02g0822 02 10593838 10598224 ECH
Dod02g0822 02 10593838 10598224 Dod05g1195 05 33711002 33717043 PCT