Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0729 ATGGAGTCGGTGGCGTTTCACCTAGACCGTCTTCCACTCGCCGCTCCCTCCGCCGCTCGCCGCTCACCTGCGAAGGCTATCGCCGCCGCCTCTTTCCGCTGCTTCCGCCGCTCACGTCCTCCTGCTCTTCCTCTTCCCAGGCTTCGTGGCTCCCCTCTTCTCGCTGCCAACACCCTCTCCCCTAATTCTGTCTCGCCAACAAGTGGAGCTTACACCGTAGGTGACTTTATGACAAAGAAAGACGAGTTGCATGTGGTAAAGCCCACAACATCTGTTGATGAAGCTCTAGAAATTCTTGTTGAGCATAGGATAACTGGTTTTCCAGTGATTGATGATAATTGGAACCTAGTTGGTGTTGTTTCGGACTATGACTTGCTAGCACTGGACTCAATATCAGGTGCAGGTCATGGGCGAAAAGAAAACACCATGTTTCCTGAAGTTGACAGTACTTGGAAAACTTTCAATGAGGTTCAGAAATTGCTGAGTAAGACGAATGGGAAGTCCATTGGCGAATTAATGACCCCTGCCCCTATGGTTGTTCGTGAGACCACTAATCTCGAGGATGCTGCTAGGTTGTTGCTGGAAACAAAATTTCGACGCCTTCCAGTTGTAGATGCTGAGGGCAGGCTGGTCGGGATTATCACAAGAGGAAATGTTGTAAGAGCCGCACTTCATATCAAACGAGCAATTGAAAAGGAAGCATGA 705 0.4965 MESVAFHLDRLPLAAPSAARRSPAKAIAAASFRCFRRSRPPALPLPRLRGSPLLAANTLSPNSVSPTSGAYTVGDFMTKKDELHVVKPTTSVDEALEILVEHRITGFPVIDDNWNLVGVVSDYDLLALDSISGAGHGRKENTMFPEVDSTWKTFNEVQKLLSKTNGKSIGELMTPAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHIKRAIEKEA* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0729 234 ProSiteProfiles CBS domain profile. 77 140 IPR000644 -
Dod02g0729 234 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE ISOFORM X1 27 232 - -
Dod02g0729 234 CDD CBS_pair_plant_CBSX 79 222 - -
Dod02g0729 234 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 27 232 - -
Dod02g0729 234 SUPERFAMILY CBS-domain pair 67 222 IPR046342 -
Dod02g0729 234 Pfam CBS domain 169 224 IPR000644 -
Dod02g0729 234 Pfam CBS domain 73 127 IPR000644 -
Dod02g0729 234 Gene3D - 68 230 IPR046342 -
Dod02g0729 234 ProSiteProfiles CBS domain profile. 173 230 IPR000644 -
Dod02g0729 234 SMART cbs_1 176 224 IPR000644 -
Dod02g0729 234 SMART cbs_1 82 130 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0729 Dod-Chr2 9478410 9483228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0729 - - gmx:100527375 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0729 02 9478410 9483228 Dod02g0729 02 9478410 9483228 ECH