Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0691 ATGCAATCTAGTAGCTCTCATAGTGAAGCCAAATACTTGTGTGCATTAAATTCTTTTTGCATGTACGTCTCAAAAATAATAGAAAACATGTCGAGTTTGAGTTTCCTTAAGTTTCATCATAGCTTTTCATGGAAGTCCTCCTCTCCGAGAAAGAATATTACCCAAAAGAACAACAGCTTTAATTCAAGTTCAAGGCAATCATCGAATGCGGGGACGAGTTTCAAGCCAAAAGCAGATGAAATGAAATGGGTGTTCCAGAAATATGACACCAACAAAGATGGCAAGATTTCACTCGAGGAGTACAAGGCAGCAGCAAGGGCATTGGATAAGGGGATTGGTGATGCTGAGGCAGTGAAGGCATTCAAAGCGATGGACTCTAATGGAGATGGGTTCATTGACTTCAAGGAGTTCATGGATATGTTCAATGGGGACCAGGGGAAGCAGGAGGTCAACGAAGCTGAGATCAAGAATGCTTTTCAGGTCTTTGACTTGAACGGTGATGGGAAGATCAGTGCTGAGGAATTGTCCCAAGTGCTCAAGAGGCTTGGAGAGAGTTGCAGCCTTAGCGCTTGTAGGAAAATGGTGAAGGGTGTAGATGGAAACGGGGATGGTTTCATAGACTTGAATGAGTTCATGAGGATGATGATGAGTGGCCAGAAACTAGCATAA 669 0.432 MQSSSSHSEAKYLCALNSFCMYVSKIIENMSSLSFLKFHHSFSWKSSSPRKNITQKNNSFNSSSRQSSNAGTSFKPKADEMKWVFQKYDTNKDGKISLEEYKAAARALDKGIGDAEAVKAFKAMDSNGDGFIDFKEFMDMFNGDQGKQEVNEAEIKNAFQVFDLNGDGKISAEELSQVLKRLGESCSLSACRKMVKGVDGNGDGFIDLNEFMRMMMSGQKLA* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0691 222 MobiDBLite consensus disorder prediction 45 74 - -
Dod02g0691 222 ProSitePatterns EF-hand calcium-binding domain. 89 101 IPR018247 -
Dod02g0691 222 Gene3D - 149 221 - -
Dod02g0691 222 SMART efh_1 80 108 IPR002048 GO:0005509
Dod02g0691 222 SMART efh_1 190 218 IPR002048 GO:0005509
Dod02g0691 222 SMART efh_1 116 144 IPR002048 GO:0005509
Dod02g0691 222 SMART efh_1 154 182 IPR002048 GO:0005509
Dod02g0691 222 ProSiteProfiles EF-hand calcium-binding domain profile. 112 147 IPR002048 GO:0005509
Dod02g0691 222 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Dod02g0691 222 PANTHER CALCIUM-BINDING PROTEIN CML34-RELATED 30 221 - -
Dod02g0691 222 SUPERFAMILY EF-hand 79 217 IPR011992 -
Dod02g0691 222 ProSitePatterns EF-hand calcium-binding domain. 125 137 IPR018247 -
Dod02g0691 222 ProSiteProfiles EF-hand calcium-binding domain profile. 150 185 IPR002048 GO:0005509
Dod02g0691 222 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 30 221 - -
Dod02g0691 222 CDD EFh 80 141 IPR002048 GO:0005509
Dod02g0691 222 CDD EFh 154 216 IPR002048 GO:0005509
Dod02g0691 222 PRINTS Recoverin family signature 168 186 - -
Dod02g0691 222 PRINTS Recoverin family signature 120 141 - -
Dod02g0691 222 ProSiteProfiles EF-hand calcium-binding domain profile. 186 221 IPR002048 GO:0005509
Dod02g0691 222 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Dod02g0691 222 Pfam EF-hand domain pair 153 215 IPR002048 GO:0005509
Dod02g0691 222 Pfam EF-hand domain pair 80 141 IPR002048 GO:0005509
Dod02g0691 222 ProSitePatterns EF-hand calcium-binding domain. 163 175 IPR018247 -
Dod02g0691 222 Gene3D - 13 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0691 Dod-Chr2 9039172 9040450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0691 30 217 EF-hand Containing Proteins AT2G15680 44.681 3.44e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0691 K13448 - gmx:100790495 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0691 02 9039172 9040450 Dod02g0691 02 9039172 9040450 ECH