Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0648 ATGACGACAGGGTCATCGAGGAGAGGGCGCATATTCTCATCAGAAGAATCAGGCAGCATTCACGGACAAAGGTATGGCAAGTTGAAGAAGGATAACCACGACGGCCACAGCTCCGACAGCCATACGAGGAAAAACGGCCTCATCACCGTTGACGCCCCACATTTAATGACGTCCGCCGAAGGCTCCGACTCCTCCCTCTCCCCTCTCTCCAAGTCCCCATGGTCCTCTCACATGAACGATGAACCCTTCAATCCAAACAACAACAACAACAACAACGAGGAAGCACTCATTGGGTCCCTTGTCCGAGAAGAAGGCCACATATACTCCCTCGCAGCAACAAAGGACCTTCTCTACACAGGCTCCGACAGCAAGAACATAAGGGTATGGAAGAACCAGCAGGAGTTCACAGGGTTCAAGTCCAACAGCGGCTTGGTTAAATCCATTGTTATTGCAGGCGAAAAGATCCTCACTGGTCACCAAGACGGAAGGATCAGAGTCTGGAAAGTCTCAGGGAAGAACGAGCAAGTTCACAGGCGCGTGGCAACGTTGCCGACTCTGAGAAACTACATCAAATGCTCGATGAAACCTAGCAACTACGTTGAAGTTCGGAGGCACCGTAACGCGCTTTGGATAAAGCACTACGACGCAATCTCTTGCCTAAGCTTAACGGAGGACCATTCCCTCATATACTCAGCTTCATGGGACAAAACATTCAAAGTTTGGCGAGCTAATTCGAATTTCAAGTGTTTGGAGTCCGTTACGGCGCACGACGACGCCGTTAACGCGCTGGTGGTTGCTTCCGATGGGTTGGTTTTCACGGGGTCAGCTGACGGCACCGTTAAGGTGTGGCGGCGAGAGGTGCAAGGGAAAGGGACGAAGCACTTCTTCTCGCAGTCTTTGTTGAAGCAAGAGTGCGCGATAACGGCGTTGGTGATAAACGGGGAAGGGACGGTTCTTTATTGCGGGTCATCTGATGGGTTGGTGAATTACTGGGTGAAGGACACGAACTATGACCATGCGGGGATCTTGAGAGGGCACAAGCTTGCGGTGCTGTGTTTGGCTGCGGCGGGGAGCTTGGTGTTCAGTGGTTCGGCGGATATGGGGATCTGCGTGTGGAAGAGGTCGACGTTGAACAATGAGCATGCTTGCTTGAGGATACTTAGCGGGCACGCTGGTCCTGTCAAGTGTCTGGCTGTGGAGAAGGACCCTGAGGCGATATCGTTCAATGAGAAGAGGTGGATTCTTTATAGTGGGAGCTTGGACAAGTCTGTTAAGGTGTGGAAGGTTTCGGAGAGTGGTGGTTGTGGTCACAACTTCTACCAGCAGCCTCGTCTTAGTGCTGAGTATCCTAGGGTGTCGTCGCTGAGAAAAATGGGGTCGAGGAGATATTAG 1392 0.5201 MTTGSSRRGRIFSSEESGSIHGQRYGKLKKDNHDGHSSDSHTRKNGLITVDAPHLMTSAEGSDSSLSPLSKSPWSSHMNDEPFNPNNNNNNNEEALIGSLVREEGHIYSLAATKDLLYTGSDSKNIRVWKNQQEFTGFKSNSGLVKSIVIAGEKILTGHQDGRIRVWKVSGKNEQVHRRVATLPTLRNYIKCSMKPSNYVEVRRHRNALWIKHYDAISCLSLTEDHSLIYSASWDKTFKVWRANSNFKCLESVTAHDDAVNALVVASDGLVFTGSADGTVKVWRREVQGKGTKHFFSQSLLKQECAITALVINGEGTVLYCGSSDGLVNYWVKDTNYDHAGILRGHKLAVLCLAAAGSLVFSGSADMGICVWKRSTLNNEHACLRILSGHAGPVKCLAVEKDPEAISFNEKRWILYSGSLDKSVKVWKVSESGGCGHNFYQQPRLSAEYPRVSSLRKMGSRRY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0648 463 ProSiteProfiles Trp-Asp (WD) repeats profile. 210 245 IPR001680 GO:0005515
Dod02g0648 463 MobiDBLite consensus disorder prediction 57 91 - -
Dod02g0648 463 PANTHER BNAANNG11810D PROTEIN 6 435 - -
Dod02g0648 463 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g0648 463 ProSiteProfiles Trp-Asp (WD) repeats profile. 405 430 IPR001680 GO:0005515
Dod02g0648 463 ProSiteProfiles Trp-Asp (WD) repeats profile. 253 283 IPR001680 GO:0005515
Dod02g0648 463 PRINTS G protein beta WD-40 repeat signature 155 169 IPR020472 -
Dod02g0648 463 PRINTS G protein beta WD-40 repeat signature 415 429 IPR020472 -
Dod02g0648 463 PRINTS G protein beta WD-40 repeat signature 271 285 IPR020472 -
Dod02g0648 463 MobiDBLite consensus disorder prediction 1 45 - -
Dod02g0648 463 Gene3D - 27 290 IPR015943 GO:0005515
Dod02g0648 463 MobiDBLite consensus disorder prediction 58 91 - -
Dod02g0648 463 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 6 435 IPR045182 -
Dod02g0648 463 SUPERFAMILY WD40 repeat-like 102 433 IPR036322 GO:0005515
Dod02g0648 463 Pfam WD domain, G-beta repeat 213 241 IPR001680 GO:0005515
Dod02g0648 463 Pfam WD domain, G-beta repeat 383 428 IPR001680 GO:0005515
Dod02g0648 463 Pfam WD domain, G-beta repeat 248 283 IPR001680 GO:0005515
Dod02g0648 463 Pfam WD domain, G-beta repeat 104 130 IPR001680 GO:0005515
Dod02g0648 463 Gene3D - 291 444 IPR015943 GO:0005515
Dod02g0648 463 SMART WD40_4 293 332 IPR001680 GO:0005515
Dod02g0648 463 SMART WD40_4 246 284 IPR001680 GO:0005515
Dod02g0648 463 SMART WD40_4 131 168 IPR001680 GO:0005515
Dod02g0648 463 SMART WD40_4 380 428 IPR001680 GO:0005515
Dod02g0648 463 SMART WD40_4 204 242 IPR001680 GO:0005515
Dod02g0648 463 SMART WD40_4 336 373 IPR001680 GO:0005515
Dod02g0648 463 SMART WD40_4 93 130 IPR001680 GO:0005515
Dod02g0648 463 MobiDBLite consensus disorder prediction 22 41 - -
Dod02g0648 463 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0648 Dod-Chr2 8474912 8476489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0648 203 429 Miscellaneous Gene Families AT5G08390 23.276 1.95e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0648 - - gmx:100778593 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0648 02 8474912 8476489 Dod02g0648 02 8474912 8476489 ECH