Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0596 ATGAAGCCACGGAAAGGTTTCTTAGCTTCACCTTTTTCCTTGGTCTTGATCTTCTTCTTCCTTATTACCATTTCTTTGTATGTGGAGAAGGCATCAAGTGATGAGGAGCAGCATGTCATGCCTCCTCACGTGGGACCTTTGGTGGAGAAGGGTGAGAGGAGGCCATTGTTTGTCACTGAATATGGAGAGATCTCTGCCGCTGATGTCATGGGTGGACATGGAGCACAATTCCACCACCTTCAGTTCATCACACTGGACCCAAACTCTCTGTTCCTTCCCGTTCTTCTCCATGCAGATATGGTCTTTTATGTCCACACAGGGAGTGGAAGGCTGTCTTGGGCAAATGAAGATCGTTCTGGCAGGATCGGTTTACGTAAAGGAGATCTCTGCAAGCTCAGTGAAGGATCTGTCTTCTACATACAGAGCAGCTTGGAGCCAGAGAGAAAGAAACTTAGGATCTATGCCTTGTTTGCCAATACAGATGATAGCACTTACGATCCGTTAATCAGTGCTTACTCAAGGATCAATGATCTGGTCAAAGGCTTTGATAGGAGAATCCTTCAAGCAGCTTTTAAGGTTCCGGAGGATTTGGTTGAAGCAATCACAAACAAAACCGACACTCCAGCTATAGTGCATGCGGCTCCAGAGGACGAGCATCATAGATTCTGGGAATTGGAGGCTTCGGTTCTTAGAAACTTCATAGGCATTCCTACCAACACTAAGAAAGTCAAAACATATAATATCCATGAAAATGACCCTGACTTCAAAAACTCTCACGGTTGGAGCCTAACAGTGACCAAGAAGCAGCTAAAAACATTGAAGGACACCGATATTGGATTTCTCATGGTGAATTTGACCCAGGCATCAATGTTGGGACCACATTGGAACCCAGAGGCAACAGAGATAGCAGTGGTGTTGCAAGGAGAAGGCATGGTCCGAGTAATATGTGGAAGCAGCAGCAGCAGCAATGATGACAATGACAACACAAAAGAATGCCAGAATAAGAGGTTTAGAGTTAAAGAGGGTGATGTTTTCGTGGTGCCTAGGTTTCATCCAATGGCTCACATGTCATTCAACAACGGCTCACTTGTTTTTATGGGATTCAGCACCGCATCAAAGGAAAGCTATCCTCAATTCTTGGCGGGAAAGACATCAGTGCTTCGGATGCTGGACAAAGAGGTAATGGCAATGTCTCTTGGTGTGAGTAACACAACCATTGACCAGCTCTTGGGGTCTCAGAATGAGTCCACCATATTCAGGTGTGTTTCGTGTGCTGAGGAAGAGGAGAAGATAATGGAGGAAGAGATAGAGGAGAGAAGAAGAGAGGAGGAGGAAAAGAGAAGGAGAGAAGAAGAAGAGAGGAAAAGAGAAGAAGAGGAGAAGAAGGAAGAAGAAGCAAAAAGGCAAGAGGAGGAAGCAATGAAGGAGATGGAGAGGAGGAAGAGAGAAGAAGAAGCAGCAAGGAGGGAGCAAGAAGAAGCTAAAAGGGAACAGGAACAGAGGGAAAGAGAAAGACAGGAGGAGGAGGAACAAGCAAGGAAGGAAGAAGAGAGGATAAAGCAAGAGGAGGAAGCTAGAAGGGAGATTGAAAAGAGAGCGCAAGAAGAAGAAGCTCAGAGGGAGCTTGAGAGGAGGAGGCAAGAAGCGGAGGCTGCGGCGAGGGAGCAGGAACAAGAACAAGCCAGAAGAGAGCAAGAAAAGAGAAGAAGAGAGGAGGAAACAGAGAGGGAGCAAGAGAGAGCAAGAGAAGAAGAGGAGGAGGAGAAGGCCATCAGGGAGCAAGAACAAGCAAGGAGACAACAGGAATGGGGGGGAAAGAGGCCACAAGAGGAGGAAGAAAGGACAAGACAAGAACAAAAACAAGGAGAAGGAGAAGGAGAGGAACCGGCATCAGAACGGGAATGGGAGCAAGCAGAAGCCAGAAGACAGCAGGAAGAAAGGGAAAAGAGAAGACAGCACCAGGGTGATAATCATAAGTCAATGACAACACAAGTGAAAGAAGCCAAAGGCTTTGAAGGAAGGAGAGTTTTGAAGAGGATGCAGAACGTTTGA 2052 0.4654 MKPRKGFLASPFSLVLIFFFLITISLYVEKASSDEEQHVMPPHVGPLVEKGERRPLFVTEYGEISAADVMGGHGAQFHHLQFITLDPNSLFLPVLLHADMVFYVHTGSGRLSWANEDRSGRIGLRKGDLCKLSEGSVFYIQSSLEPERKKLRIYALFANTDDSTYDPLISAYSRINDLVKGFDRRILQAAFKVPEDLVEAITNKTDTPAIVHAAPEDEHHRFWELEASVLRNFIGIPTNTKKVKTYNIHENDPDFKNSHGWSLTVTKKQLKTLKDTDIGFLMVNLTQASMLGPHWNPEATEIAVVLQGEGMVRVICGSSSSSNDDNDNTKECQNKRFRVKEGDVFVVPRFHPMAHMSFNNGSLVFMGFSTASKESYPQFLAGKTSVLRMLDKEVMAMSLGVSNTTIDQLLGSQNESTIFRCVSCAEEEEKIMEEEIEERRREEEEKRRREEEERKREEEEKKEEEAKRQEEEAMKEMERRKREEEAARREQEEAKREQEQRERERQEEEEQARKEEERIKQEEEARREIEKRAQEEEAQRELERRRQEAEAAAREQEQEQARREQEKRRREEETEREQERAREEEEEEKAIREQEQARRQQEWGGKRPQEEEERTRQEQKQGEGEGEEPASEREWEQAEARRQQEEREKRRQHQGDNHKSMTTQVKEAKGFEGRRVLKRMQNV* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0596 683 SMART Cupin_1_3 246 407 IPR006045 -
Dod02g0596 683 PANTHER OS03G0336100 PROTEIN-RELATED 10 468 - -
Dod02g0596 683 Coils Coil 422 600 - -
Dod02g0596 683 PANTHER PREPROMP73 10 468 - -
Dod02g0596 683 CDD cupin_7S_vicilin-like_C 253 416 - -
Dod02g0596 683 Pfam Cupin 246 405 IPR006045 -
Dod02g0596 683 MobiDBLite consensus disorder prediction 434 676 - -
Dod02g0596 683 SUPERFAMILY RmlC-like cupins 14 416 IPR011051 -
Dod02g0596 683 MobiDBLite consensus disorder prediction 434 683 - -
Dod02g0596 683 Gene3D Jelly Rolls 238 422 IPR014710 -
Dod02g0596 683 Gene3D Jelly Rolls 47 221 IPR014710 -
Dod02g0596 683 CDD cupin_7S_vicilin-like_N 56 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0596 Dod-Chr2 7706694 7710074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0596 12 432 Miscellaneous Gene Families AT2G18540 45.089 1.03e-119 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0596 - - cam:101506263 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0596 02 7706694 7710074 Dod02g0596 02 7706694 7710074 ECH