Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0586 ATGAAGTGCCCATACTGCTCAGCGGCGCAAGGAGGGCGGTGCGCCACGACGAGCTCCGGCCGGTCCATCACGGAGTGCACGTCATGCGGGCGCGTGGTGGAGGAGCGGCAGTCCTACCCACACCACCTGTTCCACGTGCGCGCCCAGGATAACCCCCTGTGCTTGGTCACATCTGATCTCCCCACCCCCGAACCCTCGCACAGCAACGGCGATGACCCTTTCGAGCCCACGGGCTTCATCACGGCCTTCTCCACTTGGTCCCTGGAGCCCAGCCCGGTCTACCTCCAGTCCTCACTCTCCTTCTCCGGCTACCTCGCCGAGCTCGAGCGCACTCTCGAATCCACTTCTTCCTCCTCTTCATCATCGTCATCGTCTTCTTCTTCTTCGTCTTCGACGGTTGTGGTGGATAATTTGAGGGCGTACATGCAGATTATCGATGTGGCGTCGATACTTGGCTTGGACTGGGATATCTCCGACCACGCTTTTCAGCTTTTCAGGGATTGTTGCTCTGCTACTTGCTTGAGAAACCGCAGCGTCGAGGCTCTTGCTACTGCTGCTCTTGTTCAAGCCATTCGAGAGGCCCAAGAGCCCAGAACTCTTCAGGAAATTTCAATAGCAGCCAATGTGCAGCAAAAGGAGATTGGGAAATACATCAAGATTCTGGGAGAAGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCAATATCGGTCCATATGCCAAGATTTTGCACGCTTCTACAGCTCAACAAATCTGCTCAGGAACTGGCTACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCAGCTGCTGCTATATATTTGGCTTGCCAACTTGAAGACAAACGCAAAACCCAGGCAGAAATTTGCAAGGTTACTGGGCTTACTGAAGTCACTCTCCGGAAAGTGTACAAGGAACTACTGGAGAATTGGGATGATTTGCTTCCCTCTAATTACACCCCAGCTGTTCCTCCAGAGAGGGCATTTCCCATGACCATAATTGCTTCCAGTCGCACTTCAACAGCTAAGGTCGATGCGGTAGAGGCTAGTTCTTTGGACACAGAAAAGTTGCCAGAAATCAAACCTAACAAACCCAGTGAGGTGTCAGTCATTGTGCACCAGTCCAGAGGGAAAGATGAGGCTGAAGGTAAAAGCAATGCTCGTGCAACCCATTCAACACTGAATCAACAGTCAACTTTTTGGCAATCCCAGCTTCCCAGTGGGACAAACAGTCATCATAATGTTTTGCAAGGAATGGATATTGATGGTGTGCCACGTAACCATCAACAGCCTGAACAGATGGCAGAAGAGACAAATGGCACTGCCAGTGGTAGTTCTCTAAACCCAAGCCAACTTTGCAGTCCTCCTAGCTCAAGTGCAAGCTCTGTTATGAGGCCGTTTTCAGCTTCGCCTTCTTCAAATACTCGATTAGTGCAGTCACCTAAGACAATGGCAGGTTATCCGGAGCACTGA 1503 0.509 MKCPYCSAAQGGRCATTSSGRSITECTSCGRVVEERQSYPHHLFHVRAQDNPLCLVTSDLPTPEPSHSNGDDPFEPTGFITAFSTWSLEPSPVYLQSSLSFSGYLAELERTLESTSSSSSSSSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDWDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPMTIIASSRTSTAKVDAVEASSLDTEKLPEIKPNKPSEVSVIVHQSRGKDEAEGKSNARATHSTLNQQSTFWQSQLPSGTNSHHNVLQGMDIDGVPRNHQQPEQMAEETNGTASGSSLNPSQLCSPPSSSASSVMRPFSASPSSNTRLVQSPKTMAGYPEH* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0586 500 MobiDBLite consensus disorder prediction 441 491 - -
Dod02g0586 500 PRINTS Transcription initiation factor IIB signature 305 319 IPR000812 GO:0006352|GO:0070897
Dod02g0586 500 PRINTS Transcription initiation factor IIB signature 184 203 IPR000812 GO:0006352|GO:0070897
Dod02g0586 500 PRINTS Transcription initiation factor IIB signature 239 257 IPR000812 GO:0006352|GO:0070897
Dod02g0586 500 PRINTS Transcription initiation factor IIB signature 273 289 IPR000812 GO:0006352|GO:0070897
Dod02g0586 500 PRINTS Transcription initiation factor IIB signature 210 225 IPR000812 GO:0006352|GO:0070897
Dod02g0586 500 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Dod02g0586 500 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 489 IPR000812 GO:0006352|GO:0070897
Dod02g0586 500 SMART cyclin_7 238 319 IPR013763 -
Dod02g0586 500 SMART cyclin_7 142 223 IPR013763 -
Dod02g0586 500 Gene3D - 238 334 - -
Dod02g0586 500 CDD CYCLIN 240 318 IPR013763 -
Dod02g0586 500 CDD CYCLIN 140 221 IPR013763 -
Dod02g0586 500 MobiDBLite consensus disorder prediction 397 426 - -
Dod02g0586 500 SUPERFAMILY Cyclin-like 236 334 IPR036915 -
Dod02g0586 500 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 489 - -
Dod02g0586 500 Gene3D - 138 229 - -
Dod02g0586 500 MobiDBLite consensus disorder prediction 359 500 - -
Dod02g0586 500 SUPERFAMILY Cyclin-like 139 229 IPR036915 -
Dod02g0586 500 Pfam Transcription factor TFIIB repeat 238 319 IPR013150 GO:0017025
Dod02g0586 500 Pfam Transcription factor TFIIB repeat 140 221 IPR013150 GO:0017025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0586 K03124 - gmx:102662353 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0586 02 7599764 7607347 Dod02g0586 02 7599764 7607347 ECH