Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0565 ATGAGGTCGAGGGACCATAGCGATGAACGAAAGGACATACGGAAGCAGTTCCTCAACACTGGGAGCTGGTACAGGATGGGTTCCAAGCAGTCCAGCATCATAGGATCTTCAATTCAGTGTGGATATTCTTCTCCTACGCAAGAGAGTATAATAAGCGATCTAAAGCTCTCACTTTCCGAGTTCTCGTTATTCGGATCTTTATCCAATGTGGGGGCGATGGTGGGAGCTATAGTCAGTGGTCAAATGGCAGGATACATCGGACGCAAAGGGTCATTGATGATTGCTGCAATCCCCAATATAATAGGATGGCTCGCAAATTCTTTCGCCAAAGACTCGTCGTTTTTATTTATGGGGAGGTTATTGGAAGGTTTTGGCGTTGATATAATCTCTTATGTGGTGCCTGTTTATATAGCCGAGATATCACCTCAACACATGAGAGGTACCCTCGGGTCAGTCAACCAGGTTGGCGCTTACATTCATAGCATTACTCAGCGTCTGCAACCAAACAGTAACGAAAACATTCTCTGTTCCACTGCAGGAATTTTACCTTGTACAGTATTAATACCTGGATTATTTTTCATACCAGAATCTCCCAGGTGGTTGGTATGGATCAAATTTCGTGCAATTATAGTAATTGATTTTTGTTTTACCTTTCATCTTCTGTTACGAGGATTTGACACAGATGTATCTGTTGAAGTATATGAAATTAAGAGATCGGTGGCATCAGCGGGAAAGGGAGTTACAGTCCGGTTTGCAGATCTCAAGATGAAAAGATTTTGGTATCCCTTGATGGTAGGGATTGGATTGCTTGTTCTCCAACAATTGAGTGGTACCAATGGAGTTTTGTTCTATTCAAGTACCATATTTGCAGATGCAGGAATTTCATCTAGCAACGCTGCTACAGTTGGACTTGGAGCTATTCAGGTCATAGCCACTGCAATGACTACTTGGTTGGTGGACAAATGTGGCCGGAGGCTGCTTCTAATAATATCCTCATCTATAGTGACAGTTAGCCTTCTCGTTGTTTCGATAGCATTCTATCTGGAGGGAGTCACATCCGAAGATTCTCATCTATACAGCATTTTGGGAATAGTTTCTGTTGTTGGGCTCGTGATACTTCCTGTGAATATAAAGGGTCTTGCTGGCAGCATAGCTACCTTGACAAATTGGCTGACTTCCTGGATGATCACGATGTCTGCAAACTTGCTTTTGATATGGAGCAGTGGAGATATGGGTCCCCGAGACTAA 1248 0.4319 MRSRDHSDERKDIRKQFLNTGSWYRMGSKQSSIIGSSIQCGYSSPTQESIISDLKLSLSEFSLFGSLSNVGAMVGAIVSGQMAGYIGRKGSLMIAAIPNIIGWLANSFAKDSSFLFMGRLLEGFGVDIISYVVPVYIAEISPQHMRGTLGSVNQVGAYIHSITQRLQPNSNENILCSTAGILPCTVLIPGLFFIPESPRWLVWIKFRAIIVIDFCFTFHLLLRGFDTDVSVEVYEIKRSVASAGKGVTVRFADLKMKRFWYPLMVGIGLLVLQQLSGTNGVLFYSSTIFADAGISSSNAATVGLGAIQVIATAMTTWLVDKCGRRLLLIISSSIVTVSLLVVSIAFYLEGVTSEDSHLYSILGIVSVVGLVILPVNIKGLAGSIATLTNWLTSWMITMSANLLLIWSSGDMGPRD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0565 415 Gene3D MFS general substrate transporter like domains 24 411 IPR036259 -
Dod02g0565 415 Pfam Sugar (and other) transporter 51 370 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod02g0565 415 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 415 IPR020846 GO:0022857
Dod02g0565 415 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 39 410 - -
Dod02g0565 415 PANTHER - 39 410 - -
Dod02g0565 415 PRINTS Sugar transporter signature 273 283 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0565 415 PRINTS Sugar transporter signature 116 135 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0565 415 SUPERFAMILY MFS general substrate transporter 42 400 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0565 Dod-Chr2 7342929 7347688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0565 1 409 Organic Solute Cotransporters AT1G75220 61.099 3.44e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0565 K03444 - gmx:100813399 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0565 02 7342929 7347688 Dod02g0565 02 7342929 7347688 ECH