Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0564 ATGTCCGATCCTCGGCCTCAGGAGTCACAACCCCCAACAACCACTCCCTCTTCCAAACTCCCATTTCGCGCCCGAAAGATCCCAAGACTCACCTCTTCCTCCAACAAAGACCCCAACACTCCAAAACCTTCTCCAACAACAACAACAACACTCTCTCCCGTTCCCGCTCCCATTCCCATTCCCATTCCGATTCCGAAGCCGTTAACATCCATCGGCGAAATGGACCTCGCCCTTCTCCACCTCCGCAACGGCGATCCCCTCCTCGCCACCTGCATCGAATCTTTCCCACCACCGAAATTCCCCTCTCACCGCTCACCCTTCTTCTCCCTCGTCAAAAGCATCATCTCCCAGCAGCTCTCCAACAAGGCAGCCGAAGCTATCGAAAACCGTTTCCTCACTCTCTGCGGGGGCCGGCCTCTAGTTGGGCCGGACTCCGTCCTCGCTCTCTCGGCCCAACAGCTCCGCCAGGTTGGGATCTCTGGGCCCAAAGCCACTTACCTCCACGACCTGGCCAGCAAGTACCGCGACGGGCTTTTGTCGGATCCCTCCATTCTCGAAATGGACGACGAGACGCTCTACACTAAGCTCACGGCGGTTAAGGGTATTGGGCCCTGGTCGGTCCACATGTTCATGATGTTCACGCTTCACAGGCCCGATGTTCTACCCGTTGGGGACCTCGTCGTTAGGAGAGGCGTGGAGAAACTGTATGGGCTCAAAGCATTGCCCCCGCCCTCGCAAATGGAGAAGCTCTGCGAGAAGTGGAAGCCTTATAGGTCCGTTGGGTCATGCTATATGTACAGGCTTATGGAAGCAAAAGGGGTGTTGCCAAAAATGGCACCAGCAGTAGCAACACCATTACTGTGA 864 0.5625 MSDPRPQESQPPTTTPSSKLPFRARKIPRLTSSSNKDPNTPKPSPTTTTTLSPVPAPIPIPIPIPKPLTSIGEMDLALLHLRNGDPLLATCIESFPPPKFPSHRSPFFSLVKSIISQQLSNKAAEAIENRFLTLCGGRPLVGPDSVLALSAQQLRQVGISGPKATYLHDLASKYRDGLLSDPSILEMDDETLYTKLTAVKGIGPWSVHMFMMFTLHRPDVLPVGDLVVRRGVEKLYGLKALPPPSQMEKLCEKWKPYRSVGSCYMYRLMEAKGVLPKMAPAVATPLL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0564 287 Gene3D - 80 267 - -
Dod02g0564 287 Gene3D Hypothetical protein; domain 2 104 217 - -
Dod02g0564 287 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g0564 287 MobiDBLite consensus disorder prediction 1 58 - -
Dod02g0564 287 SUPERFAMILY DNA-glycosylase 94 268 IPR011257 GO:0003824|GO:0006281
Dod02g0564 287 Pfam HhH-GPD superfamily base excision DNA repair protein 111 255 IPR003265 GO:0006284
Dod02g0564 287 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 7 278 - -
Dod02g0564 287 SMART endo3end 115 270 IPR003265 GO:0006284
Dod02g0564 287 MobiDBLite consensus disorder prediction 28 47 - -
Dod02g0564 287 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 7 278 - -
Dod02g0564 287 CDD ENDO3c 110 270 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0564 Dod-Chr2 7339702 7340871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0564 K01247 - mnt:21403226 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0564 02 7339702 7340871 Dod02g0564 02 7339702 7340871 ECH