Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0561 ATGGGGGCAGCAGCAGCGGCAGCAGCTAGGTTAACTTCGTGCGTGGCGGTTGCAGCTGCGGTGGCCTCCGCCTCCACGCTCTCCGATCGTGCCTACGCCGACTCGCCCTTCCGCTTCCCTTTCCTCTCTTCTTCTTCGCCTTCCAATTCCCCTTCGCCGCCCGACCCGTCTTCCGACGCCAAGTCGGAGCCTCCTCCGCCCGATGAACCAAGCAAGTCGGGCTTCGACCCGGAATCGTTGGAAAGAGGCGCCAAAGCTCTCCGTGAAATCAATAGTTCTCCCTATGCTAAACAGGTGTTTGATTTAATGCGAAAGCAGGAACAAACTCGCCTTGCTGAGTTGGATGCTGAGAAAGTTCATTTCGAACTTGTTCAATCTCAAGGAGATATTGAAAGGCAGCAGAAAATGGCTGAAGAACAACGGAATCTAATACAAGAGCAAGCACAGAGACAGGCCCAGGTTTTGCGATTTGAAGATGAGTTGGCAAGGAAAAGAATGCAGACAGATCATGAAGCTCAAAGGCGACACAATGTTGAGCTGGTCAAGATGCAAGAGGAGTCTTCTGTCAGAAAGGAGCAGGCAAGACGGGCTACTGAAGAACAGATTCAATCTCATCAGCGTCAGACTGAGAGAGAGCGAGCTGAGATAGAAAGAGAAACCATTAGAGTTAAGGCAATGGCAGAGGCTGAAGGCCGAGCCCATGAAGCAAAATTGACTGAGGATCATAAAAGGAGAATGCTTATAGAACGAATGCAAGGCGAAAGAGATAAATGGCTTGCTGCCATCAACACAACTTTTGGTCATATTGAAGGTGGTTTAAGGGTCTTATTGACTGATAGGGACAAATTGCTTATGACTGTTGGGGGAGCTACTGCCTTAGCTGCAGGAGTATATACTACTAGAGAAGGTGCTAAAGTTACATGGGGCTATATCAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAGTCATCCATGGCAAAGTTTCCTGGGTCAAGGATCATATCTCAAGCCAAAAGTAAAGTGTTAAATTACAGTACTTTGGCTAGAGCAGATAAGCCTGCTGAGAGTCAAAATGGTCTCGGAAATGTAATCCTCCATCCATCATTGCAGAGAAGAATAGAGCATCTTGCACGGGCAACATCAAATACCAAGGCCCATCAGGCACCATTCCGTAACATGCTTTTTTATGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCCATGATGACCGGAGGAGATGTTGCACCTTTGGGCCCGCAGGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCTAGAAAGGGCCTATTACTTTTCATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCACCCATATGAGTGAAGCTCAACGAAGTGCTCTAAACGCACTGCTCTTCAGAACTGGTGATCAGTCCAGAGACATAGTACTTGTCCTTGCCACCAACAGACCAGGTGATCTGGACAGTGCAGTCACTGATCGCATCGATGAAGTGATTGAATTCCCGCTTCCGGGAGAGGAGGAACGTCTAAAATTATTGAAGCTCTATTTGAACAAATATCTATGTAATGACAACAATAGCTCCAAGGGAGGCTTCTTGCTGAAGAAGCAGCCCCAGAAGATTACTGTAAAGGATTTATCTGAAGAAGTGCTCAGAGAGGCTGCCAAGAAGACAGAGGGATTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTGTATGGGCGACCAGACTGCATCTTGGATTCACAGTTATTTAAAGAAATTGTAGATTACAAGGTGGTAGAACATCATCAGCGATTAAAACTGGCTGCTGAAGGTGGCATACCTGACCAAATGCAATGA 1911 0.4736 MGAAAAAAARLTSCVAVAAAVASASTLSDRAYADSPFRFPFLSSSSPSNSPSPPDPSSDAKSEPPPPDEPSKSGFDPESLERGAKALREINSSPYAKQVFDLMRKQEQTRLAELDAEKVHFELVQSQGDIERQQKMAEEQRNLIQEQAQRQAQVLRFEDELARKRMQTDHEAQRRHNVELVKMQEESSVRKEQARRATEEQIQSHQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHKRRMLIERMQGERDKWLAAINTTFGHIEGGLRVLLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIISQAKSKVLNYSTLARADKPAESQNGLGNVILHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYLCNDNNSSKGGFLLKKQPQKITVKDLSEEVLREAAKKTEGFSGREIAKLMASVQAAVYGRPDCILDSQLFKEIVDYKVVEHHQRLKLAAEGGIPDQMQ* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0561 636 SMART AAA_5 390 523 IPR003593 -
Dod02g0561 636 Coils Coil 188 222 - -
Dod02g0561 636 MobiDBLite consensus disorder prediction 47 72 - -
Dod02g0561 636 Pfam ATPase family AAA domain-containing protein 3, N-terminal 64 322 IPR021911 -
Dod02g0561 636 Pfam ATPase family associated with various cellular activities (AAA) 394 521 IPR003959 GO:0005524|GO:0016887
Dod02g0561 636 Gene3D - 344 539 IPR027417 -
Dod02g0561 636 Coils Coil 130 150 - -
Dod02g0561 636 PANTHER PUTATIVE ATP-ASE 9 630 IPR039188 GO:0005739|GO:0007005
Dod02g0561 636 ProSitePatterns AAA-protein family signature. 493 512 IPR003960 GO:0005524|GO:0016887
Dod02g0561 636 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 9 630 - -
Dod02g0561 636 MobiDBLite consensus disorder prediction 167 215 - -
Dod02g0561 636 CDD AAA 386 521 - -
Dod02g0561 636 MobiDBLite consensus disorder prediction 38 90 - -
Dod02g0561 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 617 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0561 Dod-Chr2 7306482 7311896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0561 370 597 Miscellaneous Gene Families AT5G53170 29.114 8.69e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0561 K17681 - gmx:100777755 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0561 02 7306482 7311896 Dod02g0561 02 7306482 7311896 ECH