Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0555 ATGCCTAAACCGGGAACCCCATTTCCTTTTCCACAGCCAGCAAGAGAATTTGAAATTCTGCTAGGAGAATGGTGGAACAATGACGTGGAAGAGGTTGAAAAGCAAGGGAACAAAATGGGGTTGCCACCAAATATGTCAGATGCACATACAATCAACGGGAAACCAGGACCACTCTTCCCTTGCAAAGAGAAACACACATTTGCAATTCAGGTTGAGCAAGGCAAGACATACCTCCTGAGAATCATCAATGCAGCACTCAATGATGAGCTTTTCTTTGCCATTGCGGGTCACAGCTTTACAGTAGTTGAGGTTGATGCTGTTTACACAAAACCATTCACCACTAGTGCCATACTAATTGGACCTGGCCAAACCACAAACGTTTTGGTCCAAGCCAACCAAGTACCAGGTAGGTACTTCATGGCTACAAGGACCTTTATGGATGCACCAATCCCAGTTGACAACAAAACAGCCACAGCTATACTCCAATACAAAGGCATCCCAAACACTGTCCTCCCTACTCTTCCTCAACTGCCAGCTGGCAATGACACAGGCTTTGCATTGAGTTATAACAACAAACTCAGGAGCCTAAACTCTGCAAAGTACCCCGCTAATGTTCCCCTCAATGTTGATAGAAACCTCTTTTACACTATTGGTTTAGGCAAGAATTCTTGCCCCACATGCATCAATGGAACCCGCTTACTTGCTTCCTTAAACAATGTCTCATTTGTGATGCCTCAAACTGGACTTCTCCAAGCTCACTATTTCAACATGAAGGGAGTTTTCAGAACTGATTTTCCTGACAAGCCTTCAACAACTTTCAACTACACGGGTGCACCATTAACAGCCAATCTTGGTACTTCAACAGGCACAAGAGTGGGCAAGATTGCTTTTAATTCCACAGTGGAGCTGGTGTTGCAAGACACCAATCTCCTCACGGTTGAATCACATCCATTCCATCTTCATGGCTTTAACTTTTTTGTTGTTGGAACTGGGATTGGTAACTTTGATCCTGCTAAAGACCCTGCTAAGTACAACTTGGTAGATCCTGTTGAGAGGAACACAGTTGGGGTTCCCACTGGTGGTTGGACAGCAATTCGTTTCAGGGCTGATAATCCAGGTGTTTGGTTCTTTCACTGTCATTTAGAGTTGCACACTGGTTGGGGGTTGAAAACGGCCTTTGTTGTAGAAGATGGACCAGGACAAGATCAGTCTGTTCTGCCTCCACCAAAGGACCTTCCGGCATGCTAA 1248 0.4503 MPKPGTPFPFPQPAREFEILLGEWWNNDVEEVEKQGNKMGLPPNMSDAHTINGKPGPLFPCKEKHTFAIQVEQGKTYLLRIINAALNDELFFAIAGHSFTVVEVDAVYTKPFTTSAILIGPGQTTNVLVQANQVPGRYFMATRTFMDAPIPVDNKTATAILQYKGIPNTVLPTLPQLPAGNDTGFALSYNNKLRSLNSAKYPANVPLNVDRNLFYTIGLGKNSCPTCINGTRLLASLNNVSFVMPQTGLLQAHYFNMKGVFRTDFPDKPSTTFNYTGAPLTANLGTSTGTRVGKIAFNSTVELVLQDTNLLTVESHPFHLHGFNFFVVGTGIGNFDPAKDPAKYNLVDPVERNTVGVPTGGWTAIRFRADNPGVWFFHCHLELHTGWGLKTAFVVEDGPGQDQSVLPPPKDLPAC* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0555 415 CDD CuRO_3_LCC_plant 260 398 IPR034289 GO:0005507
Dod02g0555 415 PANTHER LACCASE 1 415 - -
Dod02g0555 415 CDD CuRO_2_LCC_plant 19 163 IPR034285 -
Dod02g0555 415 SUPERFAMILY Cupredoxins 10 196 IPR008972 -
Dod02g0555 415 Pfam Multicopper oxidase 19 165 IPR001117 -
Dod02g0555 415 SUPERFAMILY Cupredoxins 206 415 IPR008972 -
Dod02g0555 415 TIGRFAM laccase: laccase 1 415 IPR017761 GO:0046274|GO:0048046|GO:0052716
Dod02g0555 415 ProSitePatterns Multicopper oxidases signature 1. 373 393 IPR033138 -
Dod02g0555 415 Gene3D - 14 199 IPR008972 -
Dod02g0555 415 Pfam Multicopper oxidase 266 397 IPR011706 GO:0005507|GO:0016491
Dod02g0555 415 ProSitePatterns Multicopper oxidases signature 2. 378 389 IPR002355 GO:0005507
Dod02g0555 415 PANTHER MULTI-COPPER OXIDASE 1 415 IPR045087 -
Dod02g0555 415 Gene3D - 224 415 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0555 Dod-Chr2 7244496 7247411 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0555 K05909 - gmx:100798427 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0555 02 7244496 7247411 Dod02g0555 02 7244496 7247411 ECH