Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0527 ATGGCAACATACACAAAGAACCTTTCTTCCTATTTCACAGCCATTCCATCTGCATCCTCATGGTTCGAGGTATATGCTGCCTTCTCCACATTCATGGTGCTTCTCAGAACAGTAATCAACGACATTGTACCCCATCAAGTTCGATCCTTTATTGCCTCAAAGTTAGAAGCCTTCTTCACCAAGTTCCAAGCAGGTAACCAAGTCTGTCTCAAAATCGACCGAAGCTGGGATGGACAAATTGCCAAAAACCGCAATGAACTTTACTTTGCTGCCCATGATTACCTTCCCACCAGGATCAACCGATCCTACAAAGCACTCAAAGTTGGAAAGCTTGAAGACTACAAGAACCTCGTGCTTGCAGTGGATGGAAATCACGAGGTGGTGGACGAATTTGAAGGGACCAAGTTCACATGGATGCTAGATGAGCGCACAGAAAAGGATTCCTCAAATAAGAACAAGTGCACATTTATAATAACCTTCAATGACAAGCATAGAGAGAAAGCAATGGATAGGTACATACCACACGTGCTCACAACATATGAGGCCATGAAAGCTGAGCAAAAGATTGTGAAAATCTATTCCAGGTCGGATGACTACTGGGATCAGAGCGAGTTGTCTCATCCTGCAACATTCGACACGCTCGCCTTGAATCCCGAGTTGAAGCAAGCCATCATTGACGATTTGGATCGGTTCTTGAGGAGGAAGGAGCTCTACAAGAGAGTAGGGAAGCCTTGGAAAAGAGGGTACCTTTTGTATGGACCTCCCGGAACTGGGAAATCAAGCCTCGTTGCAGCTATTGCCAACTACTTGAAGTTTGATGTGTATGATTTGGAGCTCAACTCTGTTTCTTCTAACTCACAGCTCATGAGAGCCATCAGGGAAACATCCAACCGTTCCATCTTTGTGATAGAAGACATTGACTGCAACAAGGAGGTCCAAGCTCGGTCAATAACAGACACACTTGCAGATCCAGATTCAGACTCTGACAAGGAGGGTTGCAAGGTTAAGGGGTTTACTCTGTCGGGTCTGCTTAACTACATGGATGGCTTGTGGTCAAGCTGTGGGGAGGAGCGGATTATAGTATTCACCACTAACCACAAAGAGAGGATTGATCCAGCTTTGCTGCGCCCAGGCCGTATGGACTTGCACATAAACTTGCCCTTCCTTAAAGGGAAAGCGTTTCGAATCTTAGCTTCCAATTATCTGGTCATTGAAGGGCATCACCCACTCTTTGAACAGATTGACAGGCTCCTGGAGGAAGCAGATGTAACTCCTGCAGTTGTGGCAGAGCATCTGATGAGGCATGAGGACCCTGATGTTGCTTTGGAGGCACTTGTTAAATTTCTCAATGAAATGGATGTGGACAACCAAGTAGAGCTGCAGCTGAATAATACAGAACTCAGCAGTCTACAAGACTGA 1419 0.4574 MATYTKNLSSYFTAIPSASSWFEVYAAFSTFMVLLRTVINDIVPHQVRSFIASKLEAFFTKFQAGNQVCLKIDRSWDGQIAKNRNELYFAAHDYLPTRINRSYKALKVGKLEDYKNLVLAVDGNHEVVDEFEGTKFTWMLDERTEKDSSNKNKCTFIITFNDKHREKAMDRYIPHVLTTYEAMKAEQKIVKIYSRSDDYWDQSELSHPATFDTLALNPELKQAIIDDLDRFLRRKELYKRVGKPWKRGYLLYGPPGTGKSSLVAAIANYLKFDVYDLELNSVSSNSQLMRAIRETSNRSIFVIEDIDCNKEVQARSITDTLADPDSDSDKEGCKVKGFTLSGLLNYMDGLWSSCGEERIIVFTTNHKERIDPALLRPGRMDLHINLPFLKGKAFRILASNYLVIEGHHPLFEQIDRLLEEADVTPAVVAEHLMRHEDPDVALEALVKFLNEMDVDNQVELQLNNTELSSLQD* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0527 472 Pfam ATPase family associated with various cellular activities (AAA) 250 387 IPR003959 GO:0005524|GO:0016887
Dod02g0527 472 ProSitePatterns AAA-protein family signature. 358 376 IPR003960 GO:0005524|GO:0016887
Dod02g0527 472 Gene3D - 202 385 IPR027417 -
Dod02g0527 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 437 IPR027417 -
Dod02g0527 472 Pfam Domain associated at C-terminal with AAA 43 140 IPR025753 -
Dod02g0527 472 Gene3D - 386 453 - -
Dod02g0527 472 PANTHER BCS1 AAA-TYPE ATPASE 15 457 - -
Dod02g0527 472 SMART AAA_5 245 390 IPR003593 -
Dod02g0527 472 CDD AAA 234 387 - -
Dod02g0527 472 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0527 Dod-Chr2 6872657 6874336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0527 211 392 Miscellaneous Gene Families AT2G29080 29.630 5.92e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0527 - K08900 gmx:100789094 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0527 02 6872657 6874336 Dod02g0527 02 6872657 6874336 ECH