Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0505 ATGGGGTTTCTCTCTGTCCTTTCCTTACTTGTAATCACCTTAGGATGGGGATTGTTCTTGGGAGCAGAATCAAAGACGCATTGGAGTGACATAGAGTTTCTCAAGGAGCTGAAGAATGGGCTGGACCCAGGTTCCGTGAATCCCGGGTCGTGTTTGAGCTCGTGGGACTTCACTGTCGACCCATGCGACAACCTCTTCACCGAGAAGTTCACGTGCGGGCTGAGGTGCGACGCTGTCGTTTCCGGTTCGGCCCGAGTCACCGAACTCAGCCTCGACCAGGCGGGTTACTCCGGTCCCCTCCCCCCTGCCTGGAACAACAATCTCCTTCTCGAAACCCTCGACATCTCCAGCAACTTCTTCTCCGGCAACATCCCCGACTCACTGTCCAACCTGACTCGCTTGCGCCGACTCGGTCTCTCCGGCAACTCCTTCACCGGCGAGATACCCTCTTCCATTGGCTCGCTCTCCAACCTCGAAGAGCTTTACCTCGACAACAACAACCTCATAGGAACAATCCCCGAAAGCTTCAACGGCCTTGTTAGCTTGAGAAGGCTCGAAGTTCAATCCAACAAGCTCAATGGGGAGCTTCCACATTTGGGTTCTCTAAGAAGCCTTTCCTACTTCGACGCCAGCAACAATGCCGTCGCCGGAGAATTGCCGGCGCTTCTTCCGGATTCCCTGGTTCAAATCTCGATGAGGAACAACAACTTGAGTGGAGCCTTGAACTCCGAAAGCTTCAGGAACTTGATGTACTTGGAAGTGGTGGATTTGAGTTCCAACCAAATCAGTGGCTCGGTCCCTCTGGTTCTCTTCGAGCTACCTTCTCTGCAGCAACTGACGCTTTCGTACAACCAGTTATCTTCCATCGAAGGGAATTCCTTCGCTGTGGGACCTTTACAGAGCGGGCTCATAGCCGTTGATCTGAGCAACAACAGGCTTCAAGGGTTCCTGCCTTCGTTCATGGCGACGATGCCGAGGCTTTCGTCGTTGTCGTTGGAGAACAACATGTTCACGGGTCTGATACCGTTGCAGTACGTGGTGAAGGCGGTTTTCCCCGGAACCGGGGTGTCTCCTTTCGCTAGGCTTCTCTTGGGTGGGAATTACTTGTTCGGAGGGATACCAAGCCCTTTGTTGGGGCTCAAACCCGATTCTGCAAATGTAAGCTTGGTTGATAACTGTTTGTATAGGTGCCCTCATATATTCTTTTTCTGCCAGGGTGGAACACAGAAGCCCTTGGCAGAATGTAAGAGAACCATCTCTTAG 1263 0.5265 MGFLSVLSLLVITLGWGLFLGAESKTHWSDIEFLKELKNGLDPGSVNPGSCLSSWDFTVDPCDNLFTEKFTCGLRCDAVVSGSARVTELSLDQAGYSGPLPPAWNNNLLLETLDISSNFFSGNIPDSLSNLTRLRRLGLSGNSFTGEIPSSIGSLSNLEELYLDNNNLIGTIPESFNGLVSLRRLEVQSNKLNGELPHLGSLRSLSYFDASNNAVAGELPALLPDSLVQISMRNNNLSGALNSESFRNLMYLEVVDLSSNQISGSVPLVLFELPSLQQLTLSYNQLSSIEGNSFAVGPLQSGLIAVDLSNNRLQGFLPSFMATMPRLSSLSLENNMFTGLIPLQYVVKAVFPGTGVSPFARLLLGGNYLFGGIPSPLLGLKPDSANVSLVDNCLYRCPHIFFFCQGGTQKPLAECKRTIS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0505 420 Pfam Leucine rich repeat 156 214 IPR001611 GO:0005515
Dod02g0505 420 Pfam Leucine rich repeat 227 286 IPR001611 GO:0005515
Dod02g0505 420 Gene3D Ribonuclease Inhibitor 29 196 IPR032675 -
Dod02g0505 420 ProSiteProfiles Leucine-rich repeat profile. 275 296 IPR001611 GO:0005515
Dod02g0505 420 Pfam Leucine Rich Repeat 133 155 IPR001611 GO:0005515
Dod02g0505 420 Pfam Leucine Rich Repeat 110 131 IPR001611 GO:0005515
Dod02g0505 420 PRINTS Leucine-rich repeat signature 273 286 - -
Dod02g0505 420 PRINTS Leucine-rich repeat signature 252 265 - -
Dod02g0505 420 Gene3D Ribonuclease Inhibitor 197 405 IPR032675 -
Dod02g0505 420 SMART LRR_typ_2 273 296 IPR003591 -
Dod02g0505 420 SMART LRR_typ_2 179 202 IPR003591 -
Dod02g0505 420 SMART LRR_typ_2 131 154 IPR003591 -
Dod02g0505 420 SMART LRR_typ_2 155 178 IPR003591 -
Dod02g0505 420 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 4 417 - -
Dod02g0505 420 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 4 417 - -
Dod02g0505 420 SUPERFAMILY L domain-like 81 345 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0505 89 376 Receptor kinase-like Gene Family AT1G08590 32.414 1.61e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0505 - - gmx:100811366 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0505 02 6595546 6597397 Dod02g0505 02 6595546 6597397 ECH