Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0482 ATGTCGTCCGACAAGAGCGCCGACGGATCCAGATCCGCCACCAACGGCGACGCCCCCGCGCCCCGCCGCAAGGTTGCCCTGATAACCGGCATCACGGGGCAAGACGGCTCCTACCTCACCGAATTCCTCCTCGAGAAGGGGTACGAGGTGCACGGCCTCATCCGCCGCTCCTCAAACTTCAACACCCAACGGATCGACCACATCTACGTGGACCCACACAACGCCCACAAGGCCCGCATGAAGCTCCACTACGCCGACCTCTCCGACGCCTCCTCCCTCCGCCGCTGGCTCGACACCATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGATCCCCGACTACACCGCCGACGTCGTCGCCACCGGCGCCCTCCGCCTCCTCGAGGCCGTCCGCTCCCACATCGCCGCCACCAACCGCTCCCACATCCGCTACTACCAGGCCGGATCCTCCGAGATGTTCGGCTCCACTCCTCCCCCTCAGTCCGAATCCTCCCCCTTCCACCCGAGATCCCCCTACGCTGCATCCAAGTGCGCGGCGCACTGGTACACCGTCAACTACCGCGAGGCCTACGGGATCTTCGCCTGCAACGGCATCCTCTTCAACCACGAGAGCCCCCGCCGCGGGGAGAATTTCGTGACTCGCAAGATCACGCGGGCCGTGGGGCGGATCAAGATCGGGCTCCAGAGCAAGCTGTTCTTGGGGAACTTGCAGGCTTCGAGAGATTGGGGTTTTGCTGGGGACTATGTGGAGGCCATGTGGCTGATGCTGCAGCAGGAGAAGCCAGATGACTATGTTGTGGCGACGGAGGAGTCGCATACTGTGGAGGAGTTCCTGGAGGTGGCATTTGGGTATGTTGGGTTGGATTGGAGGGACCATGTGGTGATTGATAAGAGGTATTTCAGGCCTGCTGAGGTGGATAACCTTCAGGGGATTGCTCATAAGGCGAAGAATGTGCTTGGGTGGAAGCCCAGGGTTGGGTTTGAGCAGCTCGTGAAGATGATGGTGGATAATGATATTGAGTTGGCTAAGAAGGAGAAGGTGCTTGTTGATGCTGGCTACATTGATGCTCAACAACAACCTTGA 1110 0.6072 MSSDKSADGSRSATNGDAPAPRRKVALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRIDHIYVDPHNAHKARMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAATNRSHIRYYQAGSSEMFGSTPPPQSESSPFHPRSPYAASKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLDWRDHVVIDKRYFRPAEVDNLQGIAHKAKNVLGWKPRVGFEQLVKMMVDNDIELAKKEKVLVDAGYIDAQQQP* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0482 369 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 24 350 IPR006368 GO:0008446|GO:0019673
Dod02g0482 369 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 18 364 - -
Dod02g0482 369 Gene3D - 217 343 - -
Dod02g0482 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 349 IPR036291 -
Dod02g0482 369 Gene3D - 27 333 - -
Dod02g0482 369 CDD GDP_MD_SDR_e 25 349 - -
Dod02g0482 369 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 18 364 IPR006368 GO:0008446|GO:0019673
Dod02g0482 369 Pfam GDP-mannose 4,6 dehydratase 27 343 IPR016040 -
Dod02g0482 369 Hamap GDP-mannose 4,6-dehydratase [gmd]. 24 353 IPR006368 GO:0008446|GO:0019673
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0482 25 209 Miscellaneous Gene Families AT4G12250 28.497 3.03e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0482 K01711 - gmx:100797782 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0482 02 6315277 6316755 Dod02g0482 02 6315277 6316755 ECH