Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0425 ATGATGCTAGACGGAACCGAAGACGAAGAGAAGTTTCTGGCCGCCGGAATCGCTGGCCTCCAGCAGAATTCCTTCTACATGCACCGCGCATTGGACTCCAACAATCTCAGGGATGCTCTCAAGTATTCCGCTCAGATGCTCTCCGAGCTCAGGACTTCCAAGCTTTCCCCTCACAAGTACTACGAACTGTATATGCGCGCATTTGATCAGTTAAGGAAGCTGGAGATGTTTTTCGAGGAAGAGACTCGTCGCGGTTGCTCCATTATTGATCTCTATGAACTCGTCCAGCACGCTGGCAACATTTTGCCTCGATTGTATCTCCTCTGTACAGTAGGATCGGTATACATCAAATCCAAAGAAGCTCCTGCTAAGGATGTTCTAAAGGATCTTGTGGAGATGTGTCGTGGCATTCAGCACCCTGTTCGCGGACTCTTTCTCAGAAGTTATCTTTCTCAAGTTAGTAGGGACAAATTGCCGGATATTGGTTCTGAGTATGAAGGGGATGCAGATACTGTAGCAGATGCTGTAGAGTTTGTACTTCAAAATTTCACAGAAATGAACAAACTTTGGGTTCGGATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAGAAAGAAAGGAGTGAGCTGCGCGATCTTGTTGGGAAGAATCTCCATGTACTCGGTCAAATAGAGGGTGTTGACCTTGACATGTACAAAGATGTTGTGCTTCCCAGAGTATTGGAGCAGGTTGTGAATTGCAAAGATGAGTTGGCCCAATTCTACTTGATGGATTGCATAATTCAAGTCTTCCCGGACGAGTATCACTTGCAAACTCTCGATGTATTGTTGGGTGCTTGCCCTCAGCTTCAGCCATCTGTTGATATCAAGACAGTGCTGTCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGAGGTGTTGCCAGAGTTTTTGCAAGTGGAAGCTTTTTCCAAATTAAGCAATGCCATTGGCAGGGTGATAGAGGCACAGCCTGACATGCCCACTGTTGGAGTTGTAACATTGTATTCATCTCTTCTCACCTTCACTCTACATGTCCACCCTGATCGACTTGATTATGCAGATCAAGTCCTGGGAGCATGTGTGAAAAAACTCTCTGGGAAAGGGAAAATTGAGGACAGCAAGGCAACAAAGCAGGTTGTGGCTCTGTTAAGTGCTCCACTAGAAAAATATAATGATATAATGACTGCCTTGAAGCTTTCAAACTATCCTCGTGTACTGGAATACCTTGATGTTCCAACTAATAAGGTCATGGCAACTGTTATTATCCAAAGCATTATGAAAAATGGAACTCGCATTTCTAGTTCAGACAAGGTTGAAGCATTGTTTGAACTGATAAAGGGGCTTATCAAGGATTCTGATGGGACTCCTAACGATGAGCTCGATGAAGATGACTTCAAAGAGGAGCAAAATTCTGTTGCCCGTCTAATCCAGACGCTTTATAATGATGACCCAGAAGAGATGCTTAAGATCATAGAAACTGTGAGGAAGCATATAATGGCTGGAGGACCAAAACGCCTGCCTTTCACTGTTCCGCCTCTTGTTTTTACTTCTTTAAAGTTGGTCAGACAGTTGCAAGGTCAAGATGAAAATCCTTTTGGAGATGATGCATCTACAACACCGAAGAAAATTTTTCAGCTTTTAAATCAGACTATTGAGACACTGTCAAGTGTCCCGGCCCCAGAATTGGCATTGCAGTTGTACTTGCAATGTGCTGAGGCTGCAAATGACTGTGATTTGGAACCTGTTGCATACGAATTTTTCACCCAAGCTTATATTCTATATGAAGAAGAAATTTCTGATTCCCGAGCACAGGTCACGGCTATCCATTTAATAATAGGAACTCTACAAAGGATGCACGTCTTTGGTGTTGAGAACAGGGATACTTTGACTCACAAGGCTACAGGGTATTCAGCAAAGCTTTTAAAGAAGCCAGATCAGTGCAGAGCTGTGTATGCATGCTCACATCTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGGGTCCTGCTTTGCCTCAAGCGAGCTTTAAGAATTGCAAATGCTGCACAACAAATGTCCAATGCAGCAAGAGGTAGCTCCGGATCAGTTATGCTCTTCATTGAGATATTGAACAAGTATCTTTACTTCTTCGAAAAGGGAAACCCACAAGTCACGGTTGCGTCCATCCATAGCCTAATTGAATTAATCATGAATGAGATTCAAAGTGACACCACGACTGCAGATCCAGCTGCTGACGCTTTCTTAGCCAGTACTATGCGGTATATACAGTTCCAGAAACAAAAAGGCGGCACAGTTGGTGAGAAGTATGAACCCATCAAGGTTTGA 2373 0.4399 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLGQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGRVIEAQPDMPTVGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKKLSGKGKIEDSKATKQVVALLSAPLEKYNDIMTALKLSNYPRVLEYLDVPTNKVMATVIIQSIMKNGTRISSSDKVEALFELIKGLIKDSDGTPNDELDEDDFKEEQNSVARLIQTLYNDDPEEMLKIIETVRKHIMAGGPKRLPFTVPPLVFTSLKLVRQLQGQDENPFGDDASTTPKKIFQLLNQTIETLSSVPAPELALQLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMSNAARGSSGSVMLFIEILNKYLYFFEKGNPQVTVASIHSLIELIMNEIQSDTTTADPAADAFLASTMRYIQFQKQKGGTVGEKYEPIKV* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0425 790 PANTHER VACUOLAR SORTING PROTEIN 35 2 790 IPR005378 GO:0015031|GO:0030906|GO:0042147
Dod02g0425 790 Gene3D - 465 775 IPR042491 -
Dod02g0425 790 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 790 - -
Dod02g0425 790 PIRSF Retromer_Vps35 2 790 IPR005378 GO:0015031|GO:0030906|GO:0042147
Dod02g0425 790 Pfam Vacuolar protein sorting-associated protein 35 13 747 IPR005378 GO:0015031|GO:0030906|GO:0042147
Dod02g0425 790 SUPERFAMILY ARM repeat 207 631 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0425 Dod-Chr2 5668686 5678712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0425 K18468 - gmx:100811902 1471.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0425 02 5668686 5678712 Dod02g0425 02 5668686 5678712 ECH