Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0369 ATGGCCTTTGTTCCATCAAGTAAAGATAGTTATCGGAGACTGGTTAAACAAAACAACCAATCCACTACACAACGCAGTCAAACCACAAGGTCGTTTGCTTCGGCACCAAACTCTCGCTCCTATTCTTTCACGCCACACGCGGCGATTAACTTGCACGCGCCGTCGTTCGCGATGGCCGAATTCGAAGCCTTGTCGTACCCTCCCATCGAGCCATCCAACTTCGATCTCATCGTAGTCGGCACCGGCCTCCCGGAATCCGTCATCGCCGCCGCAGCCTCAGCCGTCGGAAAGACCGTCCTCCACCTCGACCCGAACTCCTTCTACGGCAGTCACTTCGCCTCCCTCTCCCTCCACGAACTGGCCTCTCACCTGAATTCTCACTCCCTCCCCGCACCGCCGCCACCGCCCTCCGCCGCATCCGGTGATTCAGATCACGCCGTGTTGGACCTCGTCCGCGAACCTCTCTACTCCGACGTGGAGATCGAATCGCGCGGTTCCGAGGACGAGATCGCGAAGCTTCGAGAAGATTCTAGAACATTCAACTTCGATTTGGTAGGGCCTAGGGCGCTGTTCAGTGCCGATAACTGCATCGATCTGTTGTTGAAATCCGGCGCGGCGCAGTACCTGGAATTCAAGGGCATCGACGCGAGCCTCGTGTACGAACCGAACGGCGGCGGTTTGGCAAACGTGCCTGATTCTCGAGGAGCGATCTTCAGGGACAAGAAGCTGTCGCTGAAGGAGAAGAACCAGCTGATGAGGTTCTTCAAGCTCGTGCAGCAGCACCTTGGTAGTGGTGGTGACGACAATGAGAATGGCGGTGAAGCTCAGAAGATTTCGGAGGAAGATTTGGAGAGTCCGTTCGTTAGTTTCTTGGAGAAGATGCGGTTGCCGCCAAAGATAAAATCGATTCTTTTGTATGCTATTGCCATGGTAGATTATGACCAAGACAATGATGAGGTTTGTAAAGATTTGCTTAAGACAAAAGATGGAATAGATCGTTTAGCTCAATACAGCTCATCAGTTGGAAGGTTTCCTAATGCACCAGGGGCTTTGCTTTATCCTATTTATGGTGAAGGAGAACTACCGCAAGCTTTTTGCCGCCGTGCTGCTGTGAAAGGTTGCATTTATGTTCTCAGGATGCCAGTTACTTCTCTGCTTATGGATAAGGTTGCCGGGTGTTATAAAGGTGTTAGATTAGCTTCGGGTCAGGATTTATATAGCCATCAGCTAATACTGGACCCGTCATTCACGATTCCATCACCATTGTCTTCGACACTGGGAGATTTTCCCAGAGAAGGGATCCAATTGAGTCAGCGAGATATGAAAGGAATGGTGGCTAGGGGAATATGCATCACAAGGAGTTCCATAAAGCTAGACATATCAAATTGCTCAGTGGTGTTACCCCCTAGATCTTTGTATCCTCAACAAGTGACGTCAGTCAGAGCTCTTCAAATAGGATCAAATCTTGCTGTTTGTCCAGCGGGCACCTTTATTTTATACTTCTCCACTTTGTGCAATGATGCCGGCGAAGGAAAGAAGTTACTAAAAGCAGCCATGAATGATCTTACAATGCCTGTATCTGGAAACTCTGAAAGTATTCCGATTGATCAAAGTGATAGTGAAGATATAAAACCCACTGTGCTCTGGAGTGCATTTTATATTCAGAAAATATTCATGGTGTGCCTCTAA 1689 0.492 MAFVPSSKDSYRRLVKQNNQSTTQRSQTTRSFASAPNSRSYSFTPHAAINLHAPSFAMAEFEALSYPPIEPSNFDLIVVGTGLPESVIAAAASAVGKTVLHLDPNSFYGSHFASLSLHELASHLNSHSLPAPPPPPSAASGDSDHAVLDLVREPLYSDVEIESRGSEDEIAKLREDSRTFNFDLVGPRALFSADNCIDLLLKSGAAQYLEFKGIDASLVYEPNGGGLANVPDSRGAIFRDKKLSLKEKNQLMRFFKLVQQHLGSGGDDNENGGEAQKISEEDLESPFVSFLEKMRLPPKIKSILLYAIAMVDYDQDNDEVCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVTSLLMDKVAGCYKGVRLASGQDLYSHQLILDPSFTIPSPLSSTLGDFPREGIQLSQRDMKGMVARGICITRSSIKLDISNCSVVLPPRSLYPQQVTSVRALQIGSNLAVCPAGTFILYFSTLCNDAGEGKKLLKAAMNDLTMPVSGNSESIPIDQSDSEDIKPTVLWSAFYIQKIFMVCL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0369 562 PIRSF Rab_ger_ger_transf_A_euk 153 559 IPR001738 GO:0005968|GO:0006886|GO:0018344
Dod02g0369 562 PIRSF Rab_ger_ger_transf_A_euk 58 169 IPR001738 GO:0005968|GO:0006886|GO:0018344
Dod02g0369 562 SUPERFAMILY FAD/NAD(P)-binding domain 71 438 IPR036188 -
Dod02g0369 562 PANTHER RAB GDP-DISSOCIATION INHIBITOR 70 557 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 MobiDBLite consensus disorder prediction 11 39 - -
Dod02g0369 562 Pfam GDP dissociation inhibitor 175 508 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 Pfam GDP dissociation inhibitor 73 131 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 PRINTS Rab GDI/REP protein family signature 93 110 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 PRINTS Rab GDI/REP protein family signature 196 212 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 PRINTS Rab GDI/REP protein family signature 247 262 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 PRINTS Rab GDI/REP protein family signature 75 93 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 PRINTS Rab GDI/REP protein family signature 357 378 IPR018203 GO:0005092|GO:0007264
Dod02g0369 562 Coils Coil 156 176 - -
Dod02g0369 562 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 70 557 - -
Dod02g0369 562 SUPERFAMILY FAD-linked reductases, C-terminal domain 442 554 - -
Dod02g0369 562 Gene3D - 71 442 IPR036188 -
Dod02g0369 562 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 154 555 - -
Dod02g0369 562 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 230 350 - -
Dod02g0369 562 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0369 Dod-Chr2 4984962 4998309 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0369 K23460 - gmx:100795946 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0369 02 4984962 4998309 Dod02g0369 02 4984962 4998309 ECH