Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0362 ATGGCGAGCGTCAGGCCTTTGCCGGAATCTGTTCGCAGCTCCGTGCGCGCCGGCATTTTCTTGTTCGACTCCACGCGCGTCGTCGAGGAGCTCGTTTTCAATAGCCTCGATGCTGGCGCCACAAAGGTATCGGTCTTTGTTAACATCGGGAGCTGCTACGTAAAAGTAGTAGACGACGGAGGTGGAATTGCTCGAGATGGACTTGAATTGGTGGGACAAAGATATGCAACATCAAAATTTCTTAATTTGGATGACCTGAATGCTACAAGTAGAAACTTTGGTTTTCGAGGGGAAGCTTTGGCTTCCATTTCCGAACTCTCTTTGTTGGAAATTGTAACAAGAACTTATGGAAGGCCCAATGGATATCGAAAAGTATTGAAGCGGTGCAAGTGTTTATATCTTGGTATTGATGATGATAGAAAGGAAGTTGGTACAACAGTTGTTGTCCGTGATTTATTTTACAACCAACCGGTTCGGAGGAAATACATGCAATCCAGCCCCAATAAGGTACTGCAGTCAATCAAGAAATGTGTACAGCATCTTGCACTTGTGCGCCCAAATATTTCCTTCAAAGTTGTTGATGTTGAAAGAGAGGATGAGCTTTTCTGCACACATTCTGCTTCTTCTACACTGTCACTTTTAACTAGTGGCTTTGGGGAGGAGGTCTCAAGCTCTCTTCAAGCTTTGGAAGTTGAGAATGATATCATCAAGCTTTCTGGATACATCTCCAGTCCATACAATGCTTTGAATATGAAGGGCTTACAGTATGTCTATATTAACTCACAGTTCATTTGCAACGGCCCAATTCATAAGCTTTTGAGTCAAATGGCTATCAGGTTTGAGCATCTGAATTCAAGAAATACTGATAACGAGTTCCAAAACAAGAAGAGAAGTAGGTCTCAGCCATGCCCAGCTTATATCTTGAATTTAAGTTGCCCCCGGTCTTGCTATGATTTGACCTTTGAGCCATCAAAAACTTATGTTCAATTCAAGGATTGGGCTTCTATACTGAATTTCATCGAGAAGGCCATCGAAAAATTCTGGGCAGAAAGCATAGCTTGTGGAGAATACCTCAATCAAGCCACTTACATGGCACAAGAAGATCAGGTACAAGAAGATCAACTGTGGAAAGCAGATGTCAATATCCTTTCAACAGAAGCAGATAAATCAAAATTTGGTACCCAAACTAGTAAGGATTGCCTGGAACTGTCCTTTTCCACTTCAAACAAGCTAACTGAAGATGAATATCATCAATCCGACGGGGAAGATGTTAGAACCTCTCTTGGTTACTTGCATCGAGGAACTGAGATATTCAAGGAGCAACAAGACAAGACACACTTTCCTTGTCAGACTGGTTTTTCTGGTAGTTTACTGGATGGTTCATATGCCAAATGCATGTCCACTGTGATGGGAAAGCATAACAGTTTGTCGATGTATGGTGACAATGGTCAATCACTAGGAGATTACTTCTTGGATGGTGAATTTCCTGTTGCAGAAAGTTTACTTAATAATGTGCCTTTTGATGCACCTAGTTCTTCACATGGAAGAAAATTCCTTAAAGTAGATGCTGATATGATGAACGAATTAGTTGAAGGTGATTCACTATATGACAATCATGGGTTTTGTTATGATGTAGAGGTTAATGGGGATTTTCAAAAGCCTTTTCTGAAGAGCTGCTCTGCACGAGGAAGTATGCTGCATGAGAAGGGTTTCTTTGTATATGATGAACATGAACTCCAAACTGATAGCTTTTGGAGCAAACAAAATCTGGGGGAGGCTGGTGGCAGTGTCAACGATTTATATGCCCAACACTATCCAGAAGTTATGAAAGAATTTAAAATTTCTGGAGGTTCTGATTTTTCCTTTAAAGCAGTGGCTGAAGATCTTCCATATTCATGCAATTCATCAACACAAACAATAAACTCTGGGTCTGATGATCTGTTATTGAATTCTGAATGGCATCCTGTCTACCAAGAACCCTCGTCACAAGCCCCTGCATGGGCTGTCGATTGTACAAGTGATAGTAATGATCTTGGAGGTGTATGCTGTGTATCTAGATACAATAAAAGGGTCCATCGTACAGAACTTCTTGATGATGAAGAAAATGAATATGACTTCAGCTACAACATTGCAAGGACTGCCAACCAACATCACTGTCCCTCAAGTTTTGATAGTGGCGGATTTAAGTTTAATGATGCTGTTTATTCTAATAAAATATTCAACACAACAGTTGACTGGCCTGACCGTGGTTGCAAACATTATACCAAAAGGTTAGATGTTTTAAATGAGGAGTCTGAGTTGCTGTTGCCTGATACACATGTTGAAAAGTGTAACAGACCTAACAAGGACAAAGGCACAAGAGATCATTTTGGACATCCAGCTTTGGAGAATAATTACGAACGATCGAAAAGAAGCTTGTCAGCTCCACCATTTCACAAACAGAAAAGAAGGTTTATTTCCTTAAATCAGCCTTCAGAAATGACAGCAAAAAGACATACTGGCCAAGTCTCCAACCTTGCTTTCAATGATCGAGAAGCTGGTGACTTTAAATACAGTCAGCAATTTCCTGATGCTCTTCACCCAAGCACTGAAGATATCTTATTGCATGAATTCGAAACCAATATGAAACAGAGATCAGATGTTCTGGGAGATACACATGTTAGTGACATTAAAGGGACTGATGAATTTGGTAGTTTCAACATTCAAAACAGTGCTCCTTTCAGAGAATTGCTCTCGAGGGAAGTGCAAGATTCCATTGCTCAAAGGACCAAATGGAGGGACTGCTCCCCTCAAATTCCAAAAAATGATAAAGTAGTTGATGTTCAAAGTCAAAACAATATACTTGATATCTCTTCTGGATTCTTGCATCTTGCTGGAGATTCGTTGATACCTGAAACAATCAGTAAAAAATGCCTTGAGGATGCTAAAGTTCTCCATCAGGTGGATAAGAAATTCATTCCAGTTGTGGCTGGTGGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAAAGAATTAGGCTGGAAGAATTGCGTCATAAGGTATTATCTGGAGAAGCAAAAGGAATAACCTATCTGGATGCTGAACAGGAACTGGTGCTGCCAGAGATTGGTTATCAGCTACTTCATAGTTATAGTGAACAGGTTAAAGATTGGGGCTGGATCTGCAACATTCATGCTCAAAATTCTGAATCCTTTAAAAGGAATTTGCATATTCTCAAAGGACAACCAATGGCCGTCACACTTATTGCAATACCGTGCATTTTAGGAGTCAACTTAAATGAAGATGATCTTTTGGAATTTCTTCAGCAGCTTGCTGACACCGATGGATCATCAACAATGCCACCCTCTGTTATACGAGTCCTGAATTTGAAAGCATGCAGAGGTGCTATTATGTTTGGGGATTCATTGCTACCATCAGAATGTTCCCTTCTTGTTGAAGAGCTAAAGCATACATCACTTTGTTTCCAATGTGCTCATGGGCGACCGACAACTGTTCCTCTAGTCAACTTGGAAGCACTGCATAATCAGATAGCCAAGCTTGGACTAATGAATGGCTGCTCAGAAGATAAATGGCATGGATTACATAGACATAAAGTATGCATTGAACGTGCAGCAGAGCGTTTATGTTCTGCCCGAGGGAGCTGA 3648 0.4082 MASVRPLPESVRSSVRAGIFLFDSTRVVEELVFNSLDAGATKVSVFVNIGSCYVKVVDDGGGIARDGLELVGQRYATSKFLNLDDLNATSRNFGFRGEALASISELSLLEIVTRTYGRPNGYRKVLKRCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKKCVQHLALVRPNISFKVVDVEREDELFCTHSASSTLSLLTSGFGEEVSSSLQALEVENDIIKLSGYISSPYNALNMKGLQYVYINSQFICNGPIHKLLSQMAIRFEHLNSRNTDNEFQNKKRSRSQPCPAYILNLSCPRSCYDLTFEPSKTYVQFKDWASILNFIEKAIEKFWAESIACGEYLNQATYMAQEDQVQEDQLWKADVNILSTEADKSKFGTQTSKDCLELSFSTSNKLTEDEYHQSDGEDVRTSLGYLHRGTEIFKEQQDKTHFPCQTGFSGSLLDGSYAKCMSTVMGKHNSLSMYGDNGQSLGDYFLDGEFPVAESLLNNVPFDAPSSSHGRKFLKVDADMMNELVEGDSLYDNHGFCYDVEVNGDFQKPFLKSCSARGSMLHEKGFFVYDEHELQTDSFWSKQNLGEAGGSVNDLYAQHYPEVMKEFKISGGSDFSFKAVAEDLPYSCNSSTQTINSGSDDLLLNSEWHPVYQEPSSQAPAWAVDCTSDSNDLGGVCCVSRYNKRVHRTELLDDEENEYDFSYNIARTANQHHCPSSFDSGGFKFNDAVYSNKIFNTTVDWPDRGCKHYTKRLDVLNEESELLLPDTHVEKCNRPNKDKGTRDHFGHPALENNYERSKRSLSAPPFHKQKRRFISLNQPSEMTAKRHTGQVSNLAFNDREAGDFKYSQQFPDALHPSTEDILLHEFETNMKQRSDVLGDTHVSDIKGTDEFGSFNIQNSAPFRELLSREVQDSIAQRTKWRDCSPQIPKNDKVVDVQSQNNILDISSGFLHLAGDSLIPETISKKCLEDAKVLHQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEAKGITYLDAEQELVLPEIGYQLLHSYSEQVKDWGWICNIHAQNSESFKRNLHILKGQPMAVTLIAIPCILGVNLNEDDLLEFLQQLADTDGSSTMPPSVIRVLNLKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLGLMNGCSEDKWHGLHRHKVCIERAAERLCSARGS* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0362 1215 Pfam MutL C terminal dimerisation domain 976 1137 IPR014790 GO:0005524|GO:0006298
Dod02g0362 1215 SUPERFAMILY Ribosomal protein S5 domain 2-like 198 349 IPR020568 -
Dod02g0362 1215 Gene3D - 980 1168 IPR042120 -
Dod02g0362 1215 Pfam DNA mismatch repair protein, C-terminal domain 217 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Dod02g0362 1215 Gene3D - 2 210 IPR036890 -
Dod02g0362 1215 Gene3D - 1021 1132 IPR042121 -
Dod02g0362 1215 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Dod02g0362 1215 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 119 - -
Dod02g0362 1215 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1173 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Dod02g0362 1215 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 25 201 IPR036890 -
Dod02g0362 1215 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Dod02g0362 1215 TIGRFAM mutl: DNA mismatch repair protein MutL 3 328 IPR002099 GO:0005524|GO:0006298|GO:0030983
Dod02g0362 1215 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1173 IPR028830 GO:0006298
Dod02g0362 1215 SMART MutL_C_2 977 1137 IPR014790 GO:0005524|GO:0006298
Dod02g0362 1215 Gene3D - 211 353 IPR014721 -
Dod02g0362 1215 SUPERFAMILY DNA mismatch repair protein MutL 975 1168 IPR037198 -
Dod02g0362 1215 CDD HATPase_MutL-MLH-PMS-like 11 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0362 Dod-Chr2 4908995 4918212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0362 K08739 - gmx:100788019 1667.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0362 02 4908995 4918212 Dod02g0362 02 4908995 4918212 ECH