Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0353 ATGGGTTTCTTGGATTTACTGGTGGTGGCTTCTATGCCAATTATTCAGGTCCTACTTATCAGTGCATTGGGAGCTTTAATGGCAACTCAGTATTTTGATAATCTTCTTTCGGCCAACTTTAGGAAATCCTTGAACAAGGTTGTCTTCCTTGTATTCACTCCTTCACTTGTATTTGCCAGTTTTGCCAAGAGTGTTTCACTTGAAGATATGATATCATGGTGGTTTATGCCCGTTAACGTTGGACTTACCTTCTTAATTGGAGGGATCCTCGGATGGATACTTGTGAAATTACTCAAGCCTAACTTGAAAGTGGAAGGCCTTATTATTGCTGCATGTTCATCAGGAAATTTGGGAAACCTTCCTATTGTAATCATCCCTGCAATCTGTGATGAGAAAGGAGGTCCATTTGGTGCAAGTGATGTTTGCCACAGCAATGCACTCTCTTATGCATCTTTCTCTATGGCGCTTGGGGGCATCTTCATCTGGACCTATACTTATCAGGTTATAAGAAGCAGATCAATAAAATTCAAGGCACTTGAGGCAGCTGATCAGATCATAAAGACTCCCAACAGAGATCTTGATGCTAATGCAGAAACTGCCCTTCTCAAGGGAAACGACAATGAAACCACTGTCGTAGAAGTGCCGACATCAGACTATAGTGGAGACTTTGAAAATCAACTTATTGCAGACCAAAATCAGTCTAGTGTATCAGAGAATGAGAAAAAATCGTTTTGGCATAGAATGATAGAATTACTGAGCGATCTTCTCGAAGAACTAATGTCACCCCCAACAATTGCTACATTTTTTGGTTTCCTCTTCGGTGCTGTTGCATGGCTAAGGAACCTAATAATCGGAGAAAATGCTCCACTGCGAGTGATCCAAGACACTCTTCAATTATTAGGGGATGGAACAATTCCTTGCATCACCCTTTTGCTTGGTAGTAACCTCACTCAAGGCTTGAAATCATCAACTGTTAAACCATTGACCCTCATCTGCATCATCATAGCCAGACTTCTCTTGCTACCTGTTGTTGGATTGTTTATTGTCAAATGGGCAGCAAATTTTGGCTTCCTCCCTGTGGATCCTTTGTTTCAATACGCGCTAGTGATGCAGTATGCCATGCCACCAGCTATGAATATCAGTACCATGGCTCAACTGTTTGAAGTAGGAAATGAAGAGTGTTCAGTTATCCTATTGTGGACATATGGTGCAGCGGCAATATCACTCACTGCTTGGTCAACATTCCTCATGTGGGTATTATCATAA 1266 0.4155 MGFLDLLVVASMPIIQVLLISALGALMATQYFDNLLSANFRKSLNKVVFLVFTPSLVFASFAKSVSLEDMISWWFMPVNVGLTFLIGGILGWILVKLLKPNLKVEGLIIAACSSGNLGNLPIVIIPAICDEKGGPFGASDVCHSNALSYASFSMALGGIFIWTYTYQVIRSRSIKFKALEAADQIIKTPNRDLDANAETALLKGNDNETTVVEVPTSDYSGDFENQLIADQNQSSVSENEKKSFWHRMIELLSDLLEELMSPPTIATFFGFLFGAVAWLRNLIIGENAPLRVIQDTLQLLGDGTIPCITLLLGSNLTQGLKSSTVKPLTLICIIIARLLLLPVVGLFIVKWAANFGFLPVDPLFQYALVMQYAMPPAMNISTMAQLFEVGNEECSVILLWTYGAAAISLTAWSTFLMWVLS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0353 421 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 421 - -
Dod02g0353 421 Pfam Membrane transport protein 10 412 IPR004776 GO:0016021|GO:0055085
Dod02g0353 421 PANTHER - 1 421 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0353 Dod-Chr2 4829969 4834378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0353 K24139 - gmx:100792072 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0353 02 4829969 4834378 Dod02g0353 02 4829969 4834378 ECH
Dod02g0353 02 4829969 4834378 Dod05g0091 05 1247242 1251103 PCT