Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0304 ATGGCTCTGCACCGGTTTTACCAGAAGTCACCCTCCGCGGTGTCGCATTTGGTCTCCAATTTTAGGAAGAGGCTTTGTGATAATGATCCTGGGGTTATGGGTGCTTCGTTGTGTCCTCTTTTTGATCTTGTGACAATTGATGTCAACTCTTATAAGGACCTTGTTAGTAGCTTTGTCAGTATTTTGAAGCAGGTCGCGGAAAGGAGGTTGCCCAAGAGCTATGATTATCATCAGATGCCGGCGCCGTTCATTCAGGTTAAGTTGCTGAAGATATTGGCATTGTTGGGGAGTGGGGACAAGCAAGCTAGTGAGAGCATGTATACAGTGCTTGGTGATATAATCAGGAAGAGTGATTCGTTGACGAATATTGGGAATGCTGTTCTCTATGAATGCATTTGCTGTGTGGCTTCAATATATCCCAATCCCAAGTTGTTAGAATCTGCCGCAGATGTAATTGCAAAGTTCTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGCTGATAAAGTTGAGCCCCCAGATTGCTGAACAACATCAACTGGCCGTGATTGACTGCTTAGAGGACCCTGATGATACTCTGAAGCGAAAGACTTTTGAATTGCTATACAAAATGACCAAGTCTTCCAATGTTGAAGTGATTGTTGACAGAATGGTTGACTACATGATTAGCATAAGTGATGATCATTACAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTAAATATTAAAGTGGCACATAATTTGATGCGGTTAATTGCCGAAGGATTTGGAGAGGAAGATGATGCTGCAGATAGCCAGCTGAGATCATCTGCTGTTGAATCATATTTGTGCATTATTGCAGAGCCAAAGCTTCCATCTGTGTTTCTTCAGGTCATCTGTTGGGTTCTGGGGGAATATGGCACAGCAGACGGAAAGTATTCTTCTTCTTATATCACTGGGAAGTTATGTGACATCGCAGAGGCATATTCAAATGATGAAACTGTTAAGTGTCAGTCTTTCATTGAAGAATTATTGGCATCTCACTCGACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCCCTTGTTGGTTTGGATGCACAAGCTGTTGAAACAATAATGCCACGAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGGACCTTTCTTTCCTCAATGGTTATGTACAGCAATCTCTAGAAAGGGGTGCTCAGCCCTATATTCCTGAGGAGGGGCGTGATGGGATGGGGAGTATCAGCAACTTCAGAAGCCAAGACCAGCATGAATCTTTGCAGCATGGCCTGAAATTTGAGGCATATGAACTTCCAAAGCCTCCAGTGCAACCAAAAGCTGCTCCAGTTTCATTTTCATCCTCAACAGACATTGTTCCAGTACCTGAGGCATTGTCTTATAGGGAGACCCACCAGATATCATCAGTGGGATCAGCATCAGAGGCAGGATCATCGGGGCTGAAGCTCCGTCTTGATGGTGTTCAGAAGAAGTGGGGAAGGCTAACTCATTCATCTCCAACATCATCTACCTCGCATTCTACTTCCCAAAAACCTGCAAATGGGGCTACTCAGGTGGATAGTGCAGCATCTGTTTATTCAAAACGCGATAGTCATGATTCAAGAAAGACACAGGTTGAAATTTCTCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGCGGCTCATCCAAACCTGAGAAAAGATCGTCTACTAGTCATAAGGTTCCAAAAGCTAGTGCTGGTACTGCAGATGTATCTCAAGGATCAAAGGCTGCAAGTGCAACTAATGAAGTATCTATGGAGAAAACCATTAATCAACCTCCTCCTCCAGATTTGCTTGACTTGGGTGAACCGACTGCAACTACTGCCCCTCCTTCTGTGGACCCCTTCAAGCAATTGGAAGGACTTCTTGACCCAAGCATGAGTACTGCAACAACTCATGATGCAGGTGCTACTACAAATGCGCCTGATATTATGTCACTCTATGGAGGGACTACTGCAAGTATCCCTGTGAGTGGGGATGGTGTAAATCTTTTATCTGAGTTGTCGAGTGCAGCTATTCGAGCTACTAGTGGAGAAACAAATGTGACAGATTTGCAGCAATCTGTGAAGGGTCCAAATGCTAAAGATTCGTTGGAGAAGGATGCTTTAGTAAGGCAGATGGGTGTGAACCCCTCAAGCCAGAATCCCAACTTGTTCAAGGACTTGCTTGGGTAA 2307 0.4391 MALHRFYQKSPSAVSHLVSNFRKRLCDNDPGVMGASLCPLFDLVTIDVNSYKDLVSSFVSILKQVAERRLPKSYDYHQMPAPFIQVKLLKILALLGSGDKQASESMYTVLGDIIRKSDSLTNIGNAVLYECICCVASIYPNPKLLESAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMVDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEEDDAADSQLRSSAVESYLCIIAEPKLPSVFLQVICWVLGEYGTADGKYSSSYITGKLCDIAEAYSNDETVKCQSFIEELLASHSTDLQQRAYELQALVGLDAQAVETIMPRDASCEDIEVDKDLSFLNGYVQQSLERGAQPYIPEEGRDGMGSISNFRSQDQHESLQHGLKFEAYELPKPPVQPKAAPVSFSSSTDIVPVPEALSYRETHQISSVGSASEAGSSGLKLRLDGVQKKWGRLTHSSPTSSTSHSTSQKPANGATQVDSAASVYSKRDSHDSRKTQVEISPEKQKLAASLFGGSSKPEKRSSTSHKVPKASAGTADVSQGSKAASATNEVSMEKTINQPPPPDLLDLGEPTATTAPPSVDPFKQLEGLLDPSMSTATTHDAGATTNAPDIMSLYGGTTASIPVSGDGVNLLSELSSAAIRATSGETNVTDLQQSVKGPNAKDSLEKDALVRQMGVNPSSQNPNLFKDLLG* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0304 768 MobiDBLite consensus disorder prediction 604 633 - -
Dod02g0304 768 PIRSF AP4_epsilon 1 363 IPR017109 GO:0015031|GO:0030124
Dod02g0304 768 PIRSF AP4_epsilon 661 768 IPR017109 GO:0015031|GO:0030124
Dod02g0304 768 PIRSF AP4_epsilon 356 638 IPR017109 GO:0015031|GO:0030124
Dod02g0304 768 Gene3D - 1 403 IPR011989 -
Dod02g0304 768 SUPERFAMILY ARM repeat 1 395 IPR016024 -
Dod02g0304 768 Pfam Adaptin N terminal region 2 335 IPR002553 GO:0006886|GO:0016192|GO:0030117
Dod02g0304 768 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 1 764 - -
Dod02g0304 768 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 1 764 - -
Dod02g0304 768 MobiDBLite consensus disorder prediction 530 657 - -
Dod02g0304 768 MobiDBLite consensus disorder prediction 530 561 - -
Dod02g0304 768 MobiDBLite consensus disorder prediction 562 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0304 Dod-Chr2 4153907 4163393 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0304 K12400 - gmx:100819573 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0304 02 4153907 4163393 Dod02g0304 02 4153907 4163393 ECH