Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0285 ATGGGTTTGCCAAGGTTTGGGCGTCCCAAGAATGGTTCCGAGCTGAGTTCAAACCTGTATGTGGCAAATTGTGGGCCTGCTGTGGGGCTATCTCACGATGACATTGCATCTGTGTTCTGCAAATATGGGGAGCTCAAGGGTGTTTATGCAGCTGATGAGAGTGGGACACGTGTCATTGTATCATTCTCTGAAGAGGGTTCTGCACATGCTGCCTTCAAGGCATTACATGGATCCCCATGCCCTCAACTTGGAGGCAGATCCTTGCATATCCGTTATTCAGTTCATCAGCCAACTCCACAGGATCAACCGAGTGACTTGATTCCTGTATCTCTTAATGCATCAGATCTGAGTATTCCAGGCATTTACCTAGCGCATGACTTCATCAGTGCTAAAGAAGAAGAGGAGTTGCTCCGAGCTGTTGACTCCCGGCCTTGGAACAGTCTTTCCAAAAGGAGGGTTCAACACTATGGTTACGAGTTTTGTTATGATACGAGGAATGTTAACACAAGGCAATCCCTAGGTGGACTTCCACCATTTGTTTCTCCAATACTTGAAAGAATATCATCATGTCCAACTTTCAAGATTGATGAACATATTGTTTTGGACCAACTTACCGTAAATGAGTACCCCCCTGGAGTGGGATTGTCCCCTCATATTGATACCCATTCAGCATTTGAAGATTTGATTTTCAGCCTTTCATTATCAGGGCCTTGTATAATGGAGTTCAGAAAATATGAAAAAGGTGATTGGCTTCCTAGAGTTGGTGGCTCAAGTGCTGATTCAAAAATAGGGAATATAGAAGATGATTCAAATTTTCTAAGGAGAACTATTTATCTTCCCCCTCGATCTTTGTTACTCATGTCTGGAGAAGCACGTTACGCATGGCACCATTATATTCCACACCACAAGATTGACAAAGTGAATGGCAGAGTCATCAAAAGGGCATTGAGAAGGGTATCTTTCACATTTCGTAAGGTTAGAGCAGGTGTGTGCAAATGTGAATTCCCTCAGTATTGCGACTCTCAAAGATAA 1032 0.4351 MGLPRFGRPKNGSELSSNLYVANCGPAVGLSHDDIASVFCKYGELKGVYAADESGTRVIVSFSEEGSAHAAFKALHGSPCPQLGGRSLHIRYSVHQPTPQDQPSDLIPVSLNASDLSIPGIYLAHDFISAKEEEELLRAVDSRPWNSLSKRRVQHYGYEFCYDTRNVNTRQSLGGLPPFVSPILERISSCPTFKIDEHIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRKYEKGDWLPRVGGSSADSKIGNIEDDSNFLRRTIYLPPRSLLLMSGEARYAWHHYIPHHKIDKVNGRVIKRALRRVSFTFRKVRAGVCKCEFPQYCDSQR* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0285 343 Gene3D - 7 106 IPR012677 -
Dod02g0285 343 Gene3D - 112 332 IPR037151 -
Dod02g0285 343 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Dod02g0285 343 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 327 IPR005123 -
Dod02g0285 343 PANTHER UNCHARACTERIZED 16 340 - -
Dod02g0285 343 SUPERFAMILY RNA-binding domain, RBD 13 101 IPR035979 GO:0003676
Dod02g0285 343 SUPERFAMILY Clavaminate synthase-like 115 327 - -
Dod02g0285 343 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 16 340 - -
Dod02g0285 343 Pfam 2OG-Fe(II) oxygenase superfamily 122 324 IPR027450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0285 Dod-Chr2 3808669 3812913 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0285 K10770 - gmx:100777529 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0285 02 3808669 3812913 Dod02g0285 02 3808669 3812913 ECH