Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0255 ATGCTGAAGGAGCAGCCTCTTCTGTTCAGTAAGAGCCCTTCGAGGAGGCGCATGCTGAGGCCTGGTGTCGGCACCGACGACAGGGGTTGGACCTCCCTTCATGTTTGCTCCCGCAAAGGTGATCTCAAACTGGTAAAGAAACTTCTCGACCAAGGAATGGATGTCAATGTGACTGCATGGGGCCCTAAATCAAAAGGGGTGACCCCTCTACACCTTGCTGCTGAAGGTGGCCACGTTGGTGTGATGGATGAACTGCTTGAGCGTGGTGCTAACATTGATGCCAGGACTAAGGGTGCTGTTGGCTGGACACCACTCCATATTGCTGCCAAAGAAAGGAGGAGGGAAGCTGTGAAATTCTTGATTGAGAATGGAGCATTCATGCCACCTGATATCAACGACAGCAGATTCAATCCTCCACTTCATTACTGCCCTGGACTTGAATGGGCATATGAGGAGATGCAGCGCCTTCGACGTGAAGACTTTTCAGCGGGGGAGACATCTTACAGTTCTGAAAGCTAA 519 0.5125 MLKEQPLLFSKSPSRRRMLRPGVGTDDRGWTSLHVCSRKGDLKLVKKLLDQGMDVNVTAWGPKSKGVTPLHLAAEGGHVGVMDELLERGANIDARTKGAVGWTPLHIAAKERRREAVKFLIENGAFMPPDINDSRFNPPLHYCPGLEWAYEEMQRLRREDFSAGETSYSSES* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0255 172 Gene3D - 22 159 IPR036770 -
Dod02g0255 172 Pfam Ankyrin repeats (3 copies) 65 125 IPR002110 GO:0005515
Dod02g0255 172 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Dod02g0255 172 SUPERFAMILY Ankyrin repeat 26 143 IPR036770 -
Dod02g0255 172 SMART ANK_2a 100 133 IPR002110 GO:0005515
Dod02g0255 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Dod02g0255 172 SMART ANK_2a 28 57 IPR002110 GO:0005515
Dod02g0255 172 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Dod02g0255 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Dod02g0255 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Dod02g0255 172 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Dod02g0255 172 PRINTS Ankyrin repeat signature 116 130 IPR002110 GO:0005515
Dod02g0255 172 PRINTS Ankyrin repeat signature 66 81 IPR002110 GO:0005515
Dod02g0255 172 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Dod02g0255 172 Pfam Ankyrin repeat 29 57 IPR002110 GO:0005515
Dod02g0255 172 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 8 171 - -
Dod02g0255 172 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 8 171 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0255 26 141 Miscellaneous Gene Families AT5G02620 35.043 4.56e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0255 - - aprc:113868977 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0255 02 3408497 3411566 Dod02g0255 02 3408497 3411566 ECH