Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0247 ATGTTGGGTTCCGTCACTACCTCTGAATGGTTCAATACTGCAGGCAGAAGTGTCAAGACAGGACTCATTGCTAGTGTCATTGTGTCTCAGTGGACATGGGCTGCTACAATATTGCAAAGCTCTAACGTTGCTTGGGAGTATGGGGTTAGCGGTCCTTTCTGGTATGCTAGTGGGGCAACCATCCAGGTATTGTTGTTTGGAATCATGGCTATTGAGATTAAAAGAAAGGCCCCTCATGCTCATACGGTGTGTGAAATTGTCAAAGCCCGTTGGGGGACTCCTGCGCACTTTGTGTTCCTCTTTTTCTGTTTCTTGACAAATATAATTGTCACGGCTATGTTGCTTCTTGGTGGTTCTGCGGTTGTAAATGCATTAACTGGAGTGAACATTTATGCTGCTAGCTTTCTAATACCACTTGGAGTAATTGTCTATACACTAGCTGGTGGACTCAAGGCCACATTCTTGGCAAGCTATATACATTCTGTCATAGTGCACATTGCTTTGGTAATTTTTGTCTACCTTGTCTACACTGCTAGCAGTGAGCTTGGTAGCCCCAGTGTTGTTTACAATCGTCTTGTGGAGGTTGCTAGCAAATCAAGAACATGTCAGGATCCTATATCACATCATGGTCAAGCTTGTGGTCCTGTAAGTGGGAACCATGGAGGATCATACCTAACAATGCTGAGTTCAGGAGGCTTAGTTTTTGGGATCATAAACATTGTTGGCAACTTTGGCACTGTGTTTGTTGACAATGGATATTGGATGAGTGCCATTGCTGCAAGACCTTCATCAACTCATAAGGGGTACTTGTTGGGAGGCTTGGTGTGGTTTGCGGTGCCATTTTCTTTGGCTACATCATTGGGTCTGGGAGCCTTGGCCCTTGATCTACCAATAAATGAAAGTGAAGCAGGTCGTGGACTTGTTCCCCCTGCTACTGCTGTGGCTCTGATGGGGAAAGGAGGGTCTATTCTTCTTCTTACCATGCTTTTTATGGCAGTGACTTCTGCTGGTTCATCAGAACTAGTTGCGGTGTCCTCATTATGCACATATGATATCTACCGCACTTACATAAATCCAGATGCAAGTGGAAAGAAAATCCTCAAAGTGTCAAGGGGTGTTATCCTAGGCTTCGGGTGTTTCATGGGGTTGCTAGCAGTTATGCTGAACAAGGCTGGAGTTTCTTTAGGTTGGATGTACCTTGCAATGGGAGTGCTGATTGGCTCAGCCGTCCTTCCTATTACCTTTATGCTTCTTTGGAGTAGAGCAAATGCAATTGGGGCCATTCTTGGAACAATAATTGGTTGCATTATGGGAATTATCACATGGCTGTCTGTTACAAAAATAGAGTATGGCCGGATAGACCTTGACACAACTGGTAGAAATGCACCAATGCTTGCAGGAAACCTTGTCTCTATACTAACTGGAGGAGCTGTTCATGCTATCTGCAGCATGTTGTGGCCTCAGAACTATGACTGGAGTACCACTAAGCAAATCACAGTGGTTGAAAAGGAAAAGACTGACCTGCCAGCAGAAGAGTTTAAAGAAGAAAGGCTAAGGAGAGCCAAAGCATGGATAGTGAAGTGGGGTGTTGGTTTCACTGGTTTAATAGTTATACTGTGGCCTGTCCTCTCCCTCGCAGCAGGAGAGTTTAGCAAGGGCTACTTCTTTTTCTGGGCAGTGATTGCTATAGCATGGGGAACTATTGGTTCTGCTGTGATAGTTGTGTTACCAGTAACTGAGAGCTGGGGAACTATCCAAACTGTGATTCTGGGCATGCTGACAAATGACAGGCTCATGGAAAAGGTGGAGGAGTTAAACTTCAAGTTGCATACAATCATGCAGGCAATACCAGAAGCAGAGAGACTCTACTTGCTTGAGAAGGAGAACGCTAAAAAATTAGAAGCCTCAGAGCAACAGGCATTGTTCTCTTCCTGCATAAGATCCTAA 1947 0.4479 MLGSVTTSEWFNTAGRSVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTPAHFVFLFFCFLTNIIVTAMLLLGGSAVVNALTGVNIYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIALVIFVYLVYTASSELGSPSVVYNRLVEVASKSRTCQDPISHHGQACGPVSGNHGGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWMSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINESEAGRGLVPPATAVALMGKGGSILLLTMLFMAVTSAGSSELVAVSSLCTYDIYRTYINPDASGKKILKVSRGVILGFGCFMGLLAVMLNKAGVSLGWMYLAMGVLIGSAVLPITFMLLWSRANAIGAILGTIIGCIMGIITWLSVTKIEYGRIDLDTTGRNAPMLAGNLVSILTGGAVHAICSMLWPQNYDWSTTKQITVVEKEKTDLPAEEFKEERLRRAKAWIVKWGVGFTGLIVILWPVLSLAAGEFSKGYFFFWAVIAIAWGTIGSAVIVVLPVTESWGTIQTVILGMLTNDRLMEKVEELNFKLHTIMQAIPEAERLYLLEKENAKKLEASEQQALFSSCIRS* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0247 648 TIGRFAM sss: transporter, solute:sodium symporter (SSS) family 11 434 IPR001734 GO:0016020|GO:0022857|GO:0055085
Dod02g0247 648 Pfam Sodium:solute symporter family 12 434 IPR001734 GO:0016020|GO:0022857|GO:0055085
Dod02g0247 648 PANTHER - 3 621 IPR031155 GO:0015204|GO:0016021|GO:0071918
Dod02g0247 648 CDD SLC5sbd_DUR3 2 486 - -
Dod02g0247 648 Gene3D Sodium/glucose cotransporter 2 518 IPR038377 -
Dod02g0247 648 ProSiteProfiles Sodium:solute symporter family profile. 1 448 IPR001734 GO:0016020|GO:0022857|GO:0055085
Dod02g0247 648 PANTHER UREA ACTIVE TRANSPORTER 3 621 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0247 2 632 Organic Solute Cotransporters AT5G45380 77.987 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0247 K20989 - gmx:100784391 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0247 02 3330998 3335615 Dod02g0247 02 3330998 3335615 ECH