Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0239 ATGAAATTGAGGATTACAGCTAGTAATAGACAAACTGCAATGGGGGAGTTGAACGGTGATGAGTATGTGACAGTTGGTGATTTACCTACTCCCAAGGGAAATCACATGAAGAAGGTTTCAGTTCTCCCTCTTGTGTTTCTCATCTTCTATGAGGTTTCAGGAGGGCCTTTTGGTGTTGAGGACACTGTGCAGGCAGCAGGTCCTCTCTTAGCCTTACTTGGTTTCTTGGTTTTCCCATTCATATGGAGCATTCCTGAAGCTTTGATCACTGCTGAGATGGGCACCATGTTCCCTGAAAACAGCGGTTATGTGGTTTGGGTTTCGGCTGCGTTGGGTCCCTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTGAGTGGGGTGATAGACAATGCTTTATATCCTGTTATGTTTCTTGACTATCTCAAGTCTGGAATCCCTGCTTTAGGAGGTGGCCTGCCTAGGATTATTGCAACTTGGGGTTTGACAATAGTTCTCACTTACTTGAACTATAGGGGTTTAACCATTGTGGGATGGGTTGCTGTCTTATTAGGGGTGTTCTCGCTCCTCCCCTTCGTCGTTATGGGGTTCTTGGCAATTCCGGACTTGAAACCTTCAAGATGGTATGTGGCAAATGTGAAAGATGTTGATTGGAACTTGTATCTGAATACTCTATTCTGGAATCTTAATTACTGGGACTCCATTAGCACTCTTTCTGGAGAAGTCGAAAATCCAAAGAAAACTCTTCCAAAAGCTTTGTTTTTTGCTTTGATCCTGGTAGTTCTGGGGTATTTCTTTCCTCTTTTAATTGGTACCGGTGCAGTTCCCCTCCATCGCGAGTTGTGGACTGATGGGTACTTCTCAGAAATTGCTGTGATTGTTGGAGGAGTGTGGTTGAGATGGTGGCTTCAGGCTGCTGCTGCAATGTCCAATATGGGAATGTTTGTTGCTGAAATGAGCAGCGACTCTTTCCAGCTTCTAGGTATGGCTGAGAGAGGAATGTTGCCTGAGTTCTTTAGCAAGAGGTCTCGCCATGGAACCCCACTTATAGGAATACTTTTTTCAGCCTCTGGTGTGATTTTACTATCATGGCTGAGCTTTCAAGAAATTGTAGCTGCAGAAAATTTTCTGTACTGTTTTGGAATGATTTTGGAGTTCATTGCATTCATATTGTTGAGGATCAAGCACCCCAACGCATCTCGGCCTTACAAGGTACCGGGTGGGACGGTTGGAGCAATCATTATGTGTATCCCTCCTACAGTATTAATTTGTGTTGTATTGGCTTTCTCCTCCCTCAAAGTAATGGTTGTGAGCCTCGTTGCTGTGGCTATTGGCCTTGTGATGCATCCTTGTCTCAAATATGTAGAGAAAAAGAGATGGATGAAGTTCTCCCACAGTTCTGAGCTCCCAGATTTTGACAATGAGGAGAGCACTCACTCTTTGGTACCTTAA 1452 0.4442 MKLRITASNRQTAMGELNGDEYVTVGDLPTPKGNHMKKVSVLPLVFLIFYEVSGGPFGVEDTVQAAGPLLALLGFLVFPFIWSIPEALITAEMGTMFPENSGYVVWVSAALGPYWGFQQGWMKWLSGVIDNALYPVMFLDYLKSGIPALGGGLPRIIATWGLTIVLTYLNYRGLTIVGWVAVLLGVFSLLPFVVMGFLAIPDLKPSRWYVANVKDVDWNLYLNTLFWNLNYWDSISTLSGEVENPKKTLPKALFFALILVVLGYFFPLLIGTGAVPLHRELWTDGYFSEIAVIVGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFSKRSRHGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFIAFILLRIKHPNASRPYKVPGGTVGAIIMCIPPTVLICVVLAFSSLKVMVVSLVAVAIGLVMHPCLKYVEKKRWMKFSHSSELPDFDNEESTHSLVP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0239 483 Pfam Amino acid permease 46 431 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dod02g0239 483 PANTHER POLYAMINE TRANSPORTER PUT1 11 477 IPR044566 GO:0022857
Dod02g0239 483 Gene3D Amino acid/polyamine transporter I 36 469 - -
Dod02g0239 483 PIRSF AA_transporter 28 481 - -
Dod02g0239 483 PANTHER POLYAMINE TRANSPORTER PUT1 11 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0239 Dod-Chr2 3260660 3262634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0239 8 480 Organic Solute Cotransporters AT1G31830 72.516 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0239 - - aip:107642412 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0239 02 3260660 3262634 Dod02g0239 02 3260660 3262634 ECH