Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0184 ATGGATCATAGCTTACGTTGTTTCGGGACAGTACCCAAAAATCATAATCTTCTATTATCTATTTTTTCTGCGGTTCTTCTCTTTGGCTTCAGTTTCGTCCCAAACGCAGCCTTCGACTTAGCCACCATACCCTTCAACGACGGCTATTCTCCTCTCTTCGGAGATGGCAACGTTGTTCGCTCCGACGACGGCAACGGCGTACGCCTCCTCCTCGATCGCTTCACAGGTTCGGGTTTCATTTCGTCCAATATGTACCAGTATGGATTCTTCAGCGCGAATATCAAGCTACCATCGAATTATACTGCTGGTATATGCGTCGCCTTTTATACATCAAACGGTGATGTGTTCGAGAAAACCCATGATGAGCTGGACTTTGAGTTCTTAGGCAACATAGCTGGAAAGCCATGGCGGTTTCAAACAAACTTGTATGGTAACGGCAGCACTCACCGTGGCCGTGAGGAGAGGTATCGCCTATGGTTCGACCCTACAAAGCAGTTCCATAGATACAGCGTCCTCTGGACTGCCAAAAACGCCATATTTTACATTGATGAAGTTCCAATCAGAGAGGTGTTACGAAGTGAGGAAATGGGGGCTGATTTCCCGTCCAAGCCAATGTCATTATATGCCACCATATGGGATGCATCAAATTGGGCCACATCAGGTGGAAGATACAAAGTGAACTATAAGTATGCACCTTTTGTAGCCGAATTCAAGGACCTAGTCCTCAAGGGTTGCTCCGTTGATCCCATCCAAGAGGTCTCCGGCAGCAAGGTTTGCTCAGACCAACAATCCGATCTTGAGGCGCAAGACTATGCCACCGTGACCCCAATGCGCCGCCTAGCCATGCGTAGGTTCCGGCAACGTTACATGTACTATTCTTATTGCTATGATACATTAAGATACCCTGTGCCACCACCAGAATGTGTTATTATACCATCAGAGAAACAAAGGTTTAAGGAGACCGGAAGGTTGAGATTTGGCGGCAGCCACCGCAGGCACTCTAGGCGGCGGGGCCGGACGACAACTCCGGTGGATGACACCGATCAGGGTGATATGTGA 1059 0.4854 MDHSLRCFGTVPKNHNLLLSIFSAVLLFGFSFVPNAAFDLATIPFNDGYSPLFGDGNVVRSDDGNGVRLLLDRFTGSGFISSNMYQYGFFSANIKLPSNYTAGICVAFYTSNGDVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKQFHRYSVLWTAKNAIFYIDEVPIREVLRSEEMGADFPSKPMSLYATIWDASNWATSGGRYKVNYKYAPFVAEFKDLVLKGCSVDPIQEVSGSKVCSDQQSDLEAQDYATVTPMRRLAMRRFRQRYMYYSYCYDTLRYPVPPPECVIIPSEKQRFKETGRLRFGGSHRRHSRRRGRTTTPVDDTDQGDM* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0184 352 PIRSF EndGlu_transf 12 313 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod02g0184 352 Pfam Glycosyl hydrolases family 16 49 229 IPR000757 GO:0004553|GO:0005975
Dod02g0184 352 MobiDBLite consensus disorder prediction 321 352 - -
Dod02g0184 352 ProSitePatterns Glycosyl hydrolases family 16 active sites. 122 132 IPR008263 GO:0004553|GO:0005975
Dod02g0184 352 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 268 308 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Dod02g0184 352 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 29 331 - -
Dod02g0184 352 CDD GH16_XET 41 308 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod02g0184 352 Gene3D - 32 308 - -
Dod02g0184 352 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 310 IPR013320 -
Dod02g0184 352 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 29 331 IPR044791 GO:0004553
Dod02g0184 352 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 36 237 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0184 Dod-Chr2 2623651 2627041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0184 25 330 Glycoside Hydrolase AT1G32170 71.010 9.21e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0184 K08235 - gmx:100786236 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0184 02 2623651 2627041 Dod02g0184 02 2623651 2627041 ECH