Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0142 ATGGCACTGAGCAACAATGTCATAGGAGCAATCAACTTCGTTGGTGTGGTCCTCTCTATCCCAATCATCGTTGCTGGGTTCTGGCTAACAAACGAGCCAGCCGATTCATGTGTCAAGTTTCTGCAATGGCCAGTCATCATCCTTGGTGTTGTGATCCTCATTGTGGCTCTGGCGGGTCTCATTGGAGCCTTTTGGAGAATCCCATGGCTCCTCATATTCTACCTCATCGCCATGCTTGTGCTCATTATATTGCTGGTTCTCTTGGTTGTTTCCGTCTACATGGTCACACTTCGGGGTCATGGCAACATTGAACCAAACCGAGCTTACTTGGAATACCGCATGGATGATTTCTCAGGCTTTCTTCGTCGAAGGGTGAGGAGTTCATTCAAGTGGGATCGCATCAGAAGCTGTCTCAGCTCAACAAACATGTGTGCTGAGTTGAACCAGAGTTATCGAATGGCTCAGGACTTCTTCAATGCACATATAACACCAATGCAGTCAGGTTGCTGCAAGCCACCGACCCAATGTGGGTTCACGTTTGTGAACCCAACCTACTGGATTAGCCCCATCAACACTGCAGCAGACATGGACTGCCTTCAGTGGAGCAACGACCAAACACAGCTTTGCTACAGCTGTGACTCATGCAAGGCCGGTTTGTTGGCGAATCTTAGGAAGGAGTGGAGGAGGGCTAATGTGATATTGATCATCACAGTCATTGCTTTAATAGCAATATATTTGGTAGGGTGCTGTGCCTTTAGGAATGCCAAAACTGAGGATCTCTTTCGCAAATACAAACAAGGCTACACTTGA 810 0.4753 MALSNNVIGAINFVGVVLSIPIIVAGFWLTNEPADSCVKFLQWPVIILGVVILIVALAGLIGAFWRIPWLLIFYLIAMLVLIILLVLLVVSVYMVTLRGHGNIEPNRAYLEYRMDDFSGFLRRRVRSSFKWDRIRSCLSSTNMCAELNQSYRMAQDFFNAHITPMQSGCCKPPTQCGFTFVNPTYWISPINTAADMDCLQWSNDQTQLCYSCDSCKAGLLANLRKEWRRANVILIITVIALIAIYLVGCCAFRNAKTEDLFRKYKQGYT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0142 269 ProSitePatterns Transmembrane 4 family signature. 49 71 IPR018503 GO:0016021
Dod02g0142 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Dod02g0142 269 Pfam Tetraspanin family 6 250 IPR018499 GO:0016021
Dod02g0142 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0142 Dod-Chr2 2097841 2100958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0142 1 269 Miscellaneous Gene Families AT5G46700 69.517 3.38e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0142 - - gmx:100795775 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0142 02 2097841 2100958 Dod02g0142 02 2097841 2100958 ECH