Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0130 ATGGATAATTCCAAAAGCAGGCATAATGATAGTTTGGGTGTGAACAAAATGGGAAAGAATATAAGGAAGAGCCCTTTACACCAGCCCAATTTTGGTAATAATGCTGCTAGACCACAGCCTCAGCCTCAGGTTTACAACATAAGCAAGAATGATTTCCGTGATATTGTTCAGCAGCTTACTGGATCCCCATCGCAGGATCCTCAACCTAGACCTCCAAACAATCCACCAAAACCACAGAGTATGCGACTGCAGAAAATTAGACCTCCCCCATTAACGCCCATCAGTCGACCTCGCTTCCCTCCGCCAATGCCAGCGCCTACAGCAGCCCCTCCACCAGTTCCGTACAATAATGCCTTACCTAGACCTGCTCAGTTTGGACAGCCATCGCCCACTCCTTTAACGCCAGGGGATATATGGGCTAATCCAACTGAGTCGCCCATATCGGCTTACATGCGCTACCTTCAAAATTCAATGATGGATCCAGGTCAATGGGGTAATCAAGTTCAGCCTCAGCTGCATCCATACCCTCAACCCCAAGCACAGGGAAATGTTCAGCCTCAACTGCCTCCACACCCTCAACCCCATGCACCGAAGAATGTTCAGCCTCAACCTGCCTTCGTCTGCTTTGCTTCCTAA 636 0.4906 MDNSKSRHNDSLGVNKMGKNIRKSPLHQPNFGNNAARPQPQPQVYNISKNDFRDIVQQLTGSPSQDPQPRPPNNPPKPQSMRLQKIRPPPLTPISRPRFPPPMPAPTAAPPPVPYNNALPRPAQFGQPSPTPLTPGDIWANPTESPISAYMRYLQNSMMDPGQWGNQVQPQLHPYPQPQAQGNVQPQLPPHPQPHAPKNVQPQPAFVCFAS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0130 211 PANTHER PROTEIN HAIKU1 2 196 IPR039612 -
Dod02g0130 211 Pfam VQ motif 40 65 IPR008889 -
Dod02g0130 211 MobiDBLite consensus disorder prediction 90 118 - -
Dod02g0130 211 MobiDBLite consensus disorder prediction 183 199 - -
Dod02g0130 211 MobiDBLite consensus disorder prediction 26 64 - -
Dod02g0130 211 PRINTS Proline rich extensin signature 174 199 - -
Dod02g0130 211 PRINTS Proline rich extensin signature 60 72 - -
Dod02g0130 211 PRINTS Proline rich extensin signature 129 146 - -
Dod02g0130 211 PRINTS Proline rich extensin signature 84 105 - -
Dod02g0130 211 PRINTS Proline rich extensin signature 35 51 - -
Dod02g0130 211 PRINTS Proline rich extensin signature 106 122 - -
Dod02g0130 211 MobiDBLite consensus disorder prediction 161 211 - -
Dod02g0130 211 PANTHER PROTEIN HAIKU1 2 196 - -
Dod02g0130 211 MobiDBLite consensus disorder prediction 1 140 - -
Dod02g0130 211 MobiDBLite consensus disorder prediction 161 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0130 Dod-Chr2 1965122 1965757 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0130 - - aprc:113868951 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0130 02 1965122 1965757 Dod02g0130 02 1965122 1965757 ECH