Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0045 ATGATGCCTAGCAACGAGGCTTCAGCGTTAGGGGAAGCAAAGGTTCCGCTGTTGGAGAATCAGGGACCTTCAAGTGATGGAGGAGAACAGCAACAGCACGATCATCATCAATTAGAGCTGTCTCGAAGGGTTTGGATCGAATCAAAGAAGCTGTGGCACATAGTGGGACCCGCAATTTTCAGCCGTATCACTTCCTACATGATGTTGGTCATCACTCAAGCCTTTGCAGGCCACCTTGGCGACCTTGAGCTCGCTGCTTTCTCCATTGCCAACAATGTTATCGTCGGCTTCGACTTTGGCCTCTTGTTGGGCATGGCAAGTGCGTTGGAAACACTATGCGGGCAAGCCTTTGGTGCAAAGAAGCACTACATGTTAGGTGTTTACATGCAGCGTTCATGGATTGTTCTGTTCATATGCTGTGTTCTGCTTTTGCCTATGTATATCTTTGCCACACCCGTGTTGAAGTTGTTGGGGCAGCCAGAGGAGCTAGCTGTTCTATCAGGGGAGGTGGCGCTGTGGATGATACCGCTTCACTTCAGCTTCGCGTTTCAGTTCCCTCTTCAGAGGTTCCTGCAGAGCCAGCTCAAGACCGGGGTTATTGCTTGGGTGTCACTTGCGGCACTCCTTGTGCATGTCCTTGTCAGTTGGTTCTTTGTGTTCAAGCTCAAGTTTGGGATTGTTGGCACCACTGCCACCGTCAATTTCTCTTGGTGGGTATTGACGTTGGGGCTTATGGGGTATTCTGTTTCTGGTGGTTGTCCTCGCACTTGGACTGGTTTCTCTGCTGAAGCTTTCTCTGGCCTTTGGGAGTTTGTTAGACTCTCCGCTGCTTCTGGAGTCATGCTTTGCTTGGAGAATTGGTATTATAGGATTCTCATATTGATGACTGGGAATCTACAGAATGCAGAGATTGCCGTGGATGCTTTGTCCATATGTATGACCATAAACGGCTTGGAAATGATGATTCCTCTGGCATTCTTTGCTGCTACAGGAGTGAGGGTTGCAAACGAGCTTGGAGCTGGGAATGGAAAAGAAGCCAAGTTTGCTACTATAGTATCTGTGGTGACATCGATTATAATAGGACTTTTCTTCTGGACGCTGATTTTGATCTTTCACGACAAATTTGGCTACATATTCTCTACTAGTAAACCCGTCCTTGATGAAGTAAACAAGCTCTCTCTTCTGTTAGCCTTCACCATTCTGCTCAACAGCGTTCAGCCAGTTCTTTCAGGTGTGGCTGTGGGATCAGGGTGGCAATCATATGTTGCATACATAAATTTGGGTTGCTACTATCTTATTGGGGTGCCTCTTGGTGTTTTGATGGGCTGGGTCTTCAATCAAGGGGTTATGGGAATTTGGGCGGGGATGATTTTTGGTGGAACAGCAACTCAGACATTGATATTAGGCTTGTTAATCATTAGGTGCGACTGGGACAGAGAGGCTGAGAGAGCCAGATTGCATTTATTAACAAAGTGGGATGATAAAAAACAAGAACTGAACTAG 1503 0.4704 MMPSNEASALGEAKVPLLENQGPSSDGGEQQQHDHHQLELSRRVWIESKKLWHIVGPAIFSRITSYMMLVITQAFAGHLGDLELAAFSIANNVIVGFDFGLLLGMASALETLCGQAFGAKKHYMLGVYMQRSWIVLFICCVLLLPMYIFATPVLKLLGQPEELAVLSGEVALWMIPLHFSFAFQFPLQRFLQSQLKTGVIAWVSLAALLVHVLVSWFFVFKLKFGIVGTTATVNFSWWVLTLGLMGYSVSGGCPRTWTGFSAEAFSGLWEFVRLSAASGVMLCLENWYYRILILMTGNLQNAEIAVDALSICMTINGLEMMIPLAFFAATGVRVANELGAGNGKEAKFATIVSVVTSIIIGLFFWTLILIFHDKFGYIFSTSKPVLDEVNKLSLLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYLIGVPLGVLMGWVFNQGVMGIWAGMIFGGTATQTLILGLLIIRCDWDREAERARLHLLTKWDDKKQELN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0045 500 TIGRFAM matE: MATE efflux family protein 57 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g0045 500 CDD MATE_eukaryotic 47 483 IPR045069 GO:0042910|GO:1990961
Dod02g0045 500 PANTHER PROTEIN DETOXIFICATION 30 485 - -
Dod02g0045 500 Pfam MatE 279 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g0045 500 Pfam MatE 57 216 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod02g0045 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 30 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0045 Dod-Chr2 879442 885934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0045 K03327 - gmx:100796652 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0045 02 879442 885934 Dod02g0045 02 879442 885934 ECH