Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0003 ATGTTGGGGGGCAACAATGGCAATCCTGTGCTTCCTGTTTTCCTGGACGAGAATCAATTCCGTTATCAAACAAATGCAGCAAATCAATTGCAGTTGTTTGGAAATTTACAAGCTGGATGTAGTGTGGATCCAGTTAATTACTTTGGAAATGATCATATCGACTCCATGATTCAGCCTAACAAACGAAGCAGGGAAATGGAAGATATCTCAAAGCAACAAAGGCTCCAGATTTCATTAAATTACAATGTCTGTCAAGATGATGCTGATCAATCTGCAAGTATTCCAAATCCTAACCCCGTATCAACAGGATTGAGGCTTTCTTATGATGATGATGAGCGTAACTCTTCTGTCACTTCTGCCAGTGGAAGCATGGGTACCACACCCTCAATCTTACTGTCTCTAGGTGACAATATCAGAACTGAGCTTGATAGGCAGCAAGAAGAGTTGGACCAGTATATTAAACTTCAGAAGGAACAGTTGTCAAAAGGAGTAAGAGACATGAAGCAAAAACACATGGCTTCTCTCCTTACTTCCATCGAGAAAGGTGTTTGTAAGAAGCTAAGGGAAAAAGACATGGAGATTGAGAACATGAACCAAAAAAATAGGGAGCTTGCAGAGAGAATAAAGCAGATGGCCATTGAAGCAGAAAACTGGCACTACAGAGCCAAGTACAATGAGTCAGTTGTCAATGTGTTGAGGAACAATCTCCAGCAGGCAATTTCACAAGGAGTTGAACAAGGGAAGGAAGGGTTTGGAGACAGTGAAGTTGATGATGCGGCTTCACACATATATCCTAATAACTTCCTCAGCATCCCGGGCCCACCAATGAAATCTACTTACAAGAACTACCAAGGCATGGAGAATCTGATTTGCAGGGCATGCAAGGCAAAGGATGTTTCCATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGACTGTGATGCATTTATCAATGTTTGTCCTGTATGCCAATTGATTAAAACTGCAAGTGTGGAGGTGTATCTCTCGTAA 1017 0.4199 MLGGNNGNPVLPVFLDENQFRYQTNAANQLQLFGNLQAGCSVDPVNYFGNDHIDSMIQPNKRSREMEDISKQQRLQISLNYNVCQDDADQSASIPNPNPVSTGLRLSYDDDERNSSVTSASGSMGTTPSILLSLGDNIRTELDRQQEELDQYIKLQKEQLSKGVRDMKQKHMASLLTSIEKGVCKKLREKDMEIENMNQKNRELAERIKQMAIEAENWHYRAKYNESVVNVLRNNLQQAISQGVEQGKEGFGDSEVDDAASHIYPNNFLSIPGPPMKSTYKNYQGMENLICRACKAKDVSMLLMPCRHLCLCKDCDAFINVCPVCQLIKTASVEVYLS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0003 338 Coils Coil 187 214 - -
Dod02g0003 338 MobiDBLite consensus disorder prediction 88 125 - -
Dod02g0003 338 Pfam Zinc finger, C3HC4 type (RING finger) 288 326 - -
Dod02g0003 338 Coils Coil 135 162 - -
Dod02g0003 338 MobiDBLite consensus disorder prediction 88 103 - -
Dod02g0003 338 ProSiteProfiles Zinc finger RING-type profile. 291 326 IPR001841 -
Dod02g0003 338 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 337 IPR017066 -
Dod02g0003 338 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 337 - -
Dod02g0003 338 PIRSF SBP1_RNase_bind 1 338 IPR017066 -
Dod02g0003 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 338 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0003 Dod-Chr2 58387 63035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0003 290 326 Miscellaneous Gene Families AT2G21380 43.243 1.11e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0003 K19042 - gmx:100791550 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0003 02 58387 63035 Dod02g0003 02 58387 63035 ECH