Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3656 ATGGAAAGCAACCAAGCAGCAAGAGAAACAGCAACGGAAGCAGTGTTTGAGGACTTGCTGCCAGTGATGGCAGAGAAGCTTGATGTGGAGGCCTTTGTGTCTGAGCTTTGTGGGGGTTTCAAGCTCCTTGCAGACCCAGAAAAGGGTCTGATCACAGCTGAGAGCCTGAGGAGGAACTCAGCTCTTTTGGGCATGGACGGGATGAGCAAAGAGGATGCTGAGGCTATGGTCAGACATGGAGATGTTGATGGTGATGGGAAGCTGAATGAGACTGAGTTTTGCATCCTTATGGTGAGGCTTAGCCCTGGGATGATGCAAGATGCTGAGGCCTGGCTTCACAAAGCAATTGAACAAGAGCTCACCAAATCATCAACTTAA 378 0.4974 MESNQAARETATEAVFEDLLPVMAEKLDVEAFVSELCGGFKLLADPEKGLITAESLRRNSALLGMDGMSKEDAEAMVRHGDVDGDGKLNETEFCILMVRLSPGMMQDAEAWLHKAIEQELTKSST* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3656 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 IPR044205 GO:0005509
Dod01g3656 125 Pfam EF-hand domain pair 47 99 IPR002048 GO:0005509
Dod01g3656 125 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Dod01g3656 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 - -
Dod01g3656 125 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Dod01g3656 125 SUPERFAMILY EF-hand 21 120 IPR011992 -
Dod01g3656 125 Gene3D - 13 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3656 Dod-Chr1 77952897 77953925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3656 10 120 EF-hand Containing Proteins AT2G46600 73.874 1.36e-58 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3656 K24345 - gmx:100787197 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3656 01 77952897 77953925 Dod07g2091 07 52050151 52051181 PCT