Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3626 ATGGGAGTCGTTGTGCCCAAGGAACACAACATGTTCTACTCACGATATTATTGGCGTACTCCACTTTGGAAGTCCATTGCATTCTGCAACTATAGTATGCTTAATGCTTGTCCTTTCCTAGGATGCGTCATGAATGATGTTTTCAGGGTTCTGCCGCCGCTTCAAGTTCAGTTTGTTCCATTTCAGACAAGTCCAAAATGGCACCGAGAAACAGTCGTGGAAAGGCCAAGGGAGGAGAAGAAGAAGACGAAGAAGAAGGATGAGAAAGTTCTTCTTCCGGTTGTGGTGGACATTGCTGTGAACCTCCCCGATGAAACTCATGTTATTCTCAAGGGAATATCAACGGACAGAATAATCGATATTCGCCGGCTTTTATCGGTGAATACAGAGACCTGTTATATTACCAATTTTTCACTATCACATGAGGTGAGAGGGCCACGTTTAAAGGACACTGTGGACGTGTCCGCACTGAAGCCATCCGTCCTCACTTTGCTCCATGAGGATTACGACGAAGATGGAGCTGTGGCCCACGTTCGACGACTGCTCGACATCGTCGCCTGCACCACCAATTTCGGTCCGTCGGCGGCGGCGAAGCTAGACGCAGCAAATAATTCCACCTCGCCGCCGCCGGCTGAGGTCGTTGACGGAGACTGCGAGATAAGCTATTCGTGCCCTAAGCTAGGGAGCTTCTACGAGTTCTTCTCTCTTTCTCATCTCGCTGCCCCTCTCCAATATATTAAGAAGAGAGTGAAACGGCAACTTCAGCAGATATCAGAGCCGGATCATTTCTTCTCCATTGATGTAAAGGTGTGTAATGGGAAAGTCTTGCACGTTGAAGCTTGCAGAAAGGGGTTTTACAGTGTTGGAAAGCAGCCCCATTTTAGTCATAATCTCGTTGATTTGCTTAGACGCCTTAGCAGAGCTTTTGATGGTGCTTATGATGATCTCATGAAGGCATTTTATGAACGTAACAAGTTTGGGAATCTTCCTTATGGCTTCAGAGCCAATACGTGGCTTGTTCCTCCGGTTGCAGTGCAATCGCCAGCAGTTTTTCCTCCCCTTCCCGTGGAGGATGAAAGTTGGGGAGGCAATAGTGGGGGTCTTGAAAGAGACGGGAAGTTTGATTTGATACCTTGGGCCAGTGAGTTTTCATGTGTTGCATCGATGCCATGCAAGATGGTGGAAGAAAGGCAAGTTCGTGATAGGAAAGCATTCCTTCTCCACAGCCTTTTTGTTGATGTTGCCATTTTCAGAGCTATCACTGCTGTCAAACATGTAATGGGAGAGCCACATTTAAGCTGCTCTGTGCCAGAAAATAATATTCTTTACGATGATAGAGTAGGTGACTTGAGTTTCAGGGTCTTAAAAGATGCTTCTGATGCGAGCTGTAAGGTTGATACTAAAATTGATGGAGTTGAAGCCACTGGAGTAAATCAAAGGGATCTAGTACAGCGAAATCTACTGAAAGGAATTACTGCTGACGAGAATACTGCAGCACATGATATTTCCACTTTAGGTATTGTCAATGTAAGATATTGTGGTTATGTGGTTGTTGTGAAAGTTGAGGGCAGAGGAAATGAAAATGTTGACTCTCCATCTCATCAAAATCAAAATATTGGATTGTTTGATCAGACAGAGGGTGGTGCCAATGCACTCAACATTAACAGTTTGAGATTACTTCTCAACATAACACAGTCAGAGAACAGTAGACCGGTGACTCAGATGCAGGCGCTTGAGAGTGAAGAGCCTGGAGCTTACTGTGCATTTGTGGAGAGGCTGATTAAAGAAAGCCTTTCCAACCTTGAGGAAGAGAAACCATGTCTGGACAATTTCATAAGATGGGAACTTGGAGCCTGCTGGATACAACATTTGCGGGACCAAAACAATACAGAAAAAGATAAGAAACCATCTTCTGATAAGGCTAAGAATGAAATGAAGGTGGAGGGGCTAGGTAAACCGCTTAGAGCCTTCAAGAACAACAAAAATATATCTGATATAAGTAATCCTAAAGTGGTATCTGAAAACTCCAAAACTCTTCTGGCATGTGTAAATGAGGAATCTGAAAGTTCTCCATTGCTCTCAGTAGAATCACAGCATGAAACTACAGCAGAAAATGAGGTTGTTTTGAAGGGGATGTTATCTGAAACTGCTTTTACTCGATTAAAAGAATCAGGCACTGGACTTCACTGCAGGTCAATGCAAGATCTGGTTGAATTGTCTCAGAAATATTACATGGACATTGCTCTTCCGAAGCTGGTAGCTGATTTTGGCTCATTGGAACTCTCTCCTGTTGATGGCCGCACACTAACAGATTTTATGCATACAAGGGGTCTACATATGCATTCTCTTGGACATGTTGTCAAGCTTTCAGAAAAGCTATCACATGTGCAATCACTTTGTATTCATGAGATGATAGTTCGAGCTTTCAAGCACATCCTGAGGGCAGTGATTGCTGTTGTTGACAAGGAGAACATGGCAACGTCAATTTCTGCTGCATTGAATTTTCTGCTTGGTGTTCCTGAAAATAAAGAATCAGATAAATCATGCAAAATCCACACCCTTGTGTGGAAATGGCTAGAAGTGTTTCTGAAGAAGCGATTTGATTGGGATCTAAGCAGCTTCAATTACAACAACTTCAGGAAATATGCAATTTTACGTGGCTTATGTCACAAGGTTGGCATTGAGCTTGTTCCAAGGGATTTCGACATGGATTCTCCAATCCCCTTCCACAAATCTGATATTGTCAGCTTGGTCCCTGTTCACAAGCAAGCTGCATGCTCATCTGCAGATGGAAGGCAGCTCCTAGAGTCATCAAAAACAGCCTTAGACAAGGGAAAACTTGAAGATGCAGTTACCTATGGGACAGAGGCTCTTGCCAAGCTGGTAGCTGTTTGTGGTCCCTATCATCGGATGACAGCGGGAGCGTACAGCTTACTTGCTGTAGTTTTATACCATGCTGGAGACTTCAATCAGGCTACTATTTATCAGCAAAAGGCTCTGGATATCAATGAGAGAGAGATAGGTCTAGATCATCCAGATACTATGAAGAGTTATGGGGATCTTGCAGTGTTCTATTACAGACTTCAACATACCGAGCTGGCACTGAAGTATGTAAAGCGTGCTTTATATCTTCTGCATCTCACCTGTGGCCCATCTCATCCAAACACTGCTGCAACATACATTAATGTGGCTATGATGGAGGAAGGTCTGGGAAATGTACATGGTGCTCTCAGATATCTTCACAAAGCTCTAAAATGCAACCAAAGATTACTTGGTCCAGATCATGTTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTAATGGAAGCATATCCTTTAAGTGTGCAGCATGAGCAAACAACTTTGCAAATTCTGCAGGCAAAACTTAGCCCAGATGATTTGCGTATACAGGATGCTGCTGCTTGGCTTGAGTATTTTGAGTCCAAGGCTTTTGAGCAGCAAGAAGCCGCTCGAAATGGTACTCGGAAAACTGATGCATCAATAGCTAGTAAAGGTCACCTAAGCGTGTCAGATCTAATTGACTACATCAGTCCCAATCATGATGTGAAAGGGAGAGATGCAGCAGTAAAGAGAAGAAGCCTGATAACAAAGGTAAGGACTGAATCCTGCCAGAACATAGGCTCAGCATGTTCTGATGAGTCTTCAAAAGGAACCCAAAAAGAGACTTCAGATGAAGAAATACTTATCACTGGACCAGGAGGTGGCGGAGATGTTGAGCAAGAGACCAACTCTACACTTGGTTCTGAACAGCCCATCTTAGATAAGACCTCAGAAGAAAAGCCACAAATTTTGGGTGAAATTTTGTCTGAAACGCATGCTGATGGAGAGGATGGATGGCGGCCAGTTCAACGGCCAAGATCATCTGGCTCATATGGCCAGCGACTGAAGCATAGAAGAGCAACAATTGGCAAAGTTTATTATCAGAAGAAGAATGTGGAGTCTGACACAGACTATCATTTTGTAAAGAATATTGATCAGAACAGTAGGTGCTACTTTTTGAAGAAGCGAACAATATCCCATGGAGGTTATACAGATGGTCATACTGTAAACATAGCCCATGGAACTAGATCTGGTAGGAAATTGGTCATAGCTGTTACATACAATCCTGTGCATGCAGCTGCTAAGACTACTGCTAAGGATACACCCGAATTCAGTTCTCATTCAGAAACTGGTTCAAGTTCATTGCCAAATGATGTTAATCCAGCAAAGCCTTCTATAGTTAGTCTTGGAAAATCTCCCTCATACAAGGAAGTAGCATTGGCTTCCCCTGGGAAAATCTCCAAGTTGCAGGTCTATCCTCAAAGTGAGATTCCGGCTCACCATGACCTTGAGCAGGAAGATATTGAAGCACATGCTAATACTAACCCAACCCTGGAAGAAATGATTCACAAGATACCAAGGCGTCTGAGAAGAATGAGGAAACACTGTTTACTGATGCTGTGCAAGATATTTTTGACAGGTGCTAAGGGACTTGAATCAGGGGATGTTGAGGCTCATGAACCAGTTGATAATATCATAATGATTGATGCTGTGGAGGATCCAGCTGATTCTCAGAAGCTAGAACTTGACACAAATACACCTGAAAGTTTGGAATTCCCTAATACTACCAATGGCAACTCGCAAGAAAGTGAAGATTTACGGGCAAATATATCTCCTTCCAGTCAGTTTGATGGCCTGGGCATCCCATGTAAGAAGTTGTCTGCATCTGCAGCTCCATTCAGTCCATCCTCAGGCATTGCCCGTGCTGCACAAGTTTCCAAGAATATAAATATGCCTTCTGGTCCTGGTGCTGTGCCACTCATTGGTCCCTGGCCAGTAAATATGAATGTTCACCATGGGGCTGCTACTGTGTTGCCTGCTGGCACTTCAATGTGTTCCTCTCCTCACCATGCATACCCATCACCTCCACCAACACCAAACATGATACAACCATTGCCATTTATGTATCCTCCTTATACTCAAGCTCAATCAATACCAACCAGCAATTTTCAAGTTACTAGCAGTGCAATTCATTCCAACCATTTCTCATGGCAATGTAATATGAACCTTACTTTGTCCAAGTATGGTCCCAACACTGTCTGGCCTGTTCATCTTATCGAATTCCCTCTTCCAGCACCTGTCGTCGAACCCATCCCTGATTCCATTTTGGACCCTCAAGAACCACATCACGTTTCTAAAAGCCCAAGTTCAGCTTTAGTTCTGCCGGAGGGCATTAATAATGTCGGGGGAACTAAGAAAGAGGTGAAAGTTCTGGAATTAGAGTCTAGTGTAGATGAAGTGGGCCGAACCCATTCAGAAAATGTAAAGGAAAATGGTAATCCAAATTTTCATGGGTCCAAAAATGCTGGAAACAAACTAGATGATATTAGCTCGAATTACAGCACTAGCAGAAGGGAAAAGAACATAGATAGTGAGAAAACCGTCAGGATGATTAGAGGAAGAAGAAACAGGAAGCAGACTCTGAGAATGCCAATTAGTTTGCTTACTCGACCCAGCAGCTCAGAGTCATTCAAAGTTGTTTATAACCGAGTAGTTGGAGGAAGTGATGTTCCCAAGTCCGCCAACTCGTCTTCTTAG 5610 0.4357 MGVVVPKEHNMFYSRYYWRTPLWKSIAFCNYSMLNACPFLGCVMNDVFRVLPPLQVQFVPFQTSPKWHRETVVERPREEKKKTKKKDEKVLLPVVVDIAVNLPDETHVILKGISTDRIIDIRRLLSVNTETCYITNFSLSHEVRGPRLKDTVDVSALKPSVLTLLHEDYDEDGAVAHVRRLLDIVACTTNFGPSAAAKLDAANNSTSPPPAEVVDGDCEISYSCPKLGSFYEFFSLSHLAAPLQYIKKRVKRQLQQISEPDHFFSIDVKVCNGKVLHVEACRKGFYSVGKQPHFSHNLVDLLRRLSRAFDGAYDDLMKAFYERNKFGNLPYGFRANTWLVPPVAVQSPAVFPPLPVEDESWGGNSGGLERDGKFDLIPWASEFSCVASMPCKMVEERQVRDRKAFLLHSLFVDVAIFRAITAVKHVMGEPHLSCSVPENNILYDDRVGDLSFRVLKDASDASCKVDTKIDGVEATGVNQRDLVQRNLLKGITADENTAAHDISTLGIVNVRYCGYVVVVKVEGRGNENVDSPSHQNQNIGLFDQTEGGANALNINSLRLLLNITQSENSRPVTQMQALESEEPGAYCAFVERLIKESLSNLEEEKPCLDNFIRWELGACWIQHLRDQNNTEKDKKPSSDKAKNEMKVEGLGKPLRAFKNNKNISDISNPKVVSENSKTLLACVNEESESSPLLSVESQHETTAENEVVLKGMLSETAFTRLKESGTGLHCRSMQDLVELSQKYYMDIALPKLVADFGSLELSPVDGRTLTDFMHTRGLHMHSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVIAVVDKENMATSISAALNFLLGVPENKESDKSCKIHTLVWKWLEVFLKKRFDWDLSSFNYNNFRKYAILRGLCHKVGIELVPRDFDMDSPIPFHKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTEALAKLVAVCGPYHRMTAGAYSLLAVVLYHAGDFNQATIYQQKALDINEREIGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHGALRYLHKALKCNQRLLGPDHVQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILQAKLSPDDLRIQDAAAWLEYFESKAFEQQEAARNGTRKTDASIASKGHLSVSDLIDYISPNHDVKGRDAAVKRRSLITKVRTESCQNIGSACSDESSKGTQKETSDEEILITGPGGGGDVEQETNSTLGSEQPILDKTSEEKPQILGEILSETHADGEDGWRPVQRPRSSGSYGQRLKHRRATIGKVYYQKKNVESDTDYHFVKNIDQNSRCYFLKKRTISHGGYTDGHTVNIAHGTRSGRKLVIAVTYNPVHAAAKTTAKDTPEFSSHSETGSSSLPNDVNPAKPSIVSLGKSPSYKEVALASPGKISKLQVYPQSEIPAHHDLEQEDIEAHANTNPTLEEMIHKIPRRLRRMRKHCLLMLCKIFLTGAKGLESGDVEAHEPVDNIIMIDAVEDPADSQKLELDTNTPESLEFPNTTNGNSQESEDLRANISPSSQFDGLGIPCKKLSASAAPFSPSSGIARAAQVSKNINMPSGPGAVPLIGPWPVNMNVHHGAATVLPAGTSMCSSPHHAYPSPPPTPNMIQPLPFMYPPYTQAQSIPTSNFQVTSSAIHSNHFSWQCNMNLTLSKYGPNTVWPVHLIEFPLPAPVVEPIPDSILDPQEPHHVSKSPSSALVLPEGINNVGGTKKEVKVLELESSVDEVGRTHSENVKENGNPNFHGSKNAGNKLDDISSNYSTSRREKNIDSEKTVRMIRGRRNRKQTLRMPISLLTRPSSSESFKVVYNRVVGGSDVPKSANSSS* 1870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3626 1869 SUPERFAMILY TPR-like 938 1126 IPR011990 GO:0005515
Dod01g3626 1869 MobiDBLite consensus disorder prediction 1778 1802 - -
Dod01g3626 1869 MobiDBLite consensus disorder prediction 1534 1556 - -
Dod01g3626 1869 MobiDBLite consensus disorder prediction 1390 1412 - -
Dod01g3626 1869 MobiDBLite consensus disorder prediction 1218 1254 - -
Dod01g3626 1869 Pfam Mitochondrial function, CLU-N-term 115 185 IPR028275 -
Dod01g3626 1869 MobiDBLite consensus disorder prediction 1385 1419 - -
Dod01g3626 1869 CDD CLU-central 763 903 IPR033646 -
Dod01g3626 1869 Gene3D Tetratricopeptide repeat domain 932 1045 IPR011990 GO:0005515
Dod01g3626 1869 Gene3D Tetratricopeptide repeat domain 1046 1186 IPR011990 GO:0005515
Dod01g3626 1869 MobiDBLite consensus disorder prediction 1285 1306 - -
Dod01g3626 1869 Pfam Tetratricopeptide repeat 972 1042 - -
Dod01g3626 1869 Pfam Tetratricopeptide repeat 1056 1130 - -
Dod01g3626 1869 Pfam Translation initiation factor eIF3 subunit 135 761 902 IPR033646 -
Dod01g3626 1869 MobiDBLite consensus disorder prediction 1769 1815 - -
Dod01g3626 1869 SUPERFAMILY Hypothetical protein c14orf129, hspc210 258 323 IPR023231 -
Dod01g3626 1869 ProSiteProfiles TPR repeat profile. 973 1006 IPR019734 GO:0005515
Dod01g3626 1869 SMART tpr_5 973 1006 IPR019734 GO:0005515
Dod01g3626 1869 SMART tpr_5 1015 1048 IPR019734 GO:0005515
Dod01g3626 1869 SMART tpr_5 1057 1090 IPR019734 GO:0005515
Dod01g3626 1869 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 80 1857 - -
Dod01g3626 1869 ProSiteProfiles Clueless (Clu) domain profile. 357 635 IPR025697 -
Dod01g3626 1869 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 80 1857 IPR027523 GO:0006996
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3626 Dod-Chr1 77590667 77606774 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3626 K03255 - gmx:100784117 2437.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3626 01 77590667 77606774 Dod07g2068 07 51750619 51764869 PCT