Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3606 ATGTTGGAGAAAGTGGAAGAGTTCAACATGGAGAAGGTGATCGAAGAGTTTGAGGCACTGACGAAGGATGCAGGAAGGTCTCAGAGGGAAACCCTGAAAAGGATTCTGGAGGATAACGCAAACGCAGAGTATTTGCAGAATTTGGGCCTTGACGGAAGAACTGACCCGGAGAGTTTCAAGGCCTGTGTCCCACTCGTTACCCACAAAGAATTGGAGCCTTATATCTACAGAATTATTGATGGAGATTCTTCTCCTATTCTCACTGGAAAACCCATCACTACTATGTCTCTAAGCTCTGGCACTACTCAGGGGAAGCCAAAATATCTGCCATGGAATGATGAATTGTTTGAAACCACAATGCAAATATATCAGACCTCTTTTGCCTATAGGAACAGGGAGTTTCCAATCAAGAATGGGAAGGCTTTAAGCTTTATATACAGCAGCAAACAGTTCAAAACAAAAGGGGGTCTCGCTGCTGGAACTGCCACAACCAATTTGTTCCGCAATGCGCGCTACAAGCGCGAAATGAAGGCACTCCAATCCCAATGTTGCAGCCCAGATGAAGTGATATTCGGCCCTGATTTCCACACGTCACTGTACTGCCACCTCTTGTGTGGCCTAATCTTCCGGGAGGAGGTTCAGCTTGTGTCTTCCACATTTGCTCATAGCATTGTCCATGCTTTCAGAACCTTTGAACAAGTGTGGGAAGAGCTTTGCAGTGATATCCGAGAAGGGGTTCTCACCAGCAGAGTCACGGTTCCATCAGTTAGGATGGCCATGTCTAAGCTGCTGAAACCAAACCCAGAACTGGCCAACATGATCCACAAGAAATGTGTCGGCCTGAGCAACTGGTATGGGCTGATACCAGAGCTTTTTCCAAACGCTAAGTATATTTATGGGATCATGACTGGGTCAATGGAGCCTTATCTGAAGAAACTGAGGCACTATGCTGGGGAGCTGCCTTTGTTGACTGCTGACTATGGATCCTCTGAAGGGTGGATTGCTGCAAATGTGAACCCAAAACTGCCCCCTGAATTGGCCACTTATGCTGTGCTGCCTCACATTGGTTACTATGAATTCATCCCTCTGACAGAGCTTGAGAATGCCAAGGGGGAGCCTACTTTCCTCAGCATTAATCCCAAGCCTGTCGGCCTCACTGAAGTGAAGATCGGTGAGGAGTATGAAATTGTTATCACCAATCCTGCAGGTTTATACAGGTATAGGCTGGGTGATGTTGTGAAGGTTATGGGATTCCATAACTCCACTCCAGAACTCAAGTTTGTTCGGCGAAGCAGTCTTCTGCTTACCATCAACATCGACAAGAACACAGAGAAGGACTTGCAGTTAGCTGTGGAAGCTGCAGGGAAGTTGCTAGCAGAAGAGAAACTGGAAGTTGTTGACTTCACCAGCCACGTTAACTTATCTAAAGAGCCAGGTCACTATGTCATCTTCTGGGAAATCAATGGGGAAGCGAGTGAACAAGTGCTGAGTGAATGCTGCAACTGCTTGGACAAGTCCTTTGTTGACGCAGGCTACACAAGCTCCCGCAAGGTCAACTGCATTGGGGCCCTCGAACTCCGAGTTGTCAGGAGGGGAACCTTCCAGAAGATTCTTGACCATTTCCTAGGACTAGGTGCCGCTGTTAGTCAGTACAAGACACCAAGGTGTGTAGGTCCTACAAACGCCAGGGTGTTGCAAATCTTGACTGAAAATGTTGTCAAGAACTATGTCAGTACTGCATTCAATTGA 1749 0.4711 MLEKVEEFNMEKVIEEFEALTKDAGRSQRETLKRILEDNANAEYLQNLGLDGRTDPESFKACVPLVTHKELEPYIYRIIDGDSSPILTGKPITTMSLSSGTTQGKPKYLPWNDELFETTMQIYQTSFAYRNREFPIKNGKALSFIYSSKQFKTKGGLAAGTATTNLFRNARYKREMKALQSQCCSPDEVIFGPDFHTSLYCHLLCGLIFREEVQLVSSTFAHSIVHAFRTFEQVWEELCSDIREGVLTSRVTVPSVRMAMSKLLKPNPELANMIHKKCVGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIAANVNPKLPPELATYAVLPHIGYYEFIPLTELENAKGEPTFLSINPKPVGLTEVKIGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSTPELKFVRRSSLLLTINIDKNTEKDLQLAVEAAGKLLAEEKLEVVDFTSHVNLSKEPGHYVIFWEINGEASEQVLSECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILDHFLGLGAAVSQYKTPRCVGPTNARVLQILTENVVKNYVSTAFN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3606 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
Dod01g3606 582 Coils Coil 10 30 - -
Dod01g3606 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Dod01g3606 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3606 Dod-Chr1 77392829 77397514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3606 17 579 EF-hand Containing Proteins AT1G23160 38.927 3.32e-138 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3606 K14506 - gmx:100794598 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3606 01 77392829 77397514 Dod07g2047 07 51315824 51320763 PCT