Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3526 ATGATGAAGTGCTTTCTACCTTGCTTTCGCGCTTCCAAACGCTCTAAACACTTGCGCTCTGTGAATGCAACTCCCACAGAAGGACACCAAACCCATGTCGCTGATGGAGCTAGTAGTCAACTCACACACCAAAAGAATGTTGCACAATCAGAATTCGAAGAGCAATCAAATGGAAGTGCTCAAGTGACATTAAACAAGGAACTGATAGAAAGGTTGGAGGAGCAAGAAAAAGCAGCAAGGGAAGAAGACATACCTCAGATGGGTGAGAAGAAAGATAAGCATGGAGAACATGATGATGCGGGTAATGACAACGGATTGCTTCACGAAGAAGAGTGTTCAGAGTCGCTGTTCTCTCTTTCCATTGAGTCTAGAAAGCAAGTTTCAGGAGCTGACAAGGCAGAGGCTGAAGTTAACAGTCCAATGCAACTCTGTGGAGCAGCAAAAGAGGAATGTAATCAAATTCAAGGTAAGATTTCCGAAGGTGCTGGAGTTGAGTCACCCACGAAGGAAGCAAAGGAGGGCACCGAGGTATTGATAGTAAAACCTGAAGAGCAACAAAATGGCATTGCCGTAATGAAGGTGAACACCAATGAAGAAGAATCTGCTGCCAACAAGTTAGTGGAAAACAATGAAGAAAAAGGAAAAGCAAGATCGCCAAAACACACCGAATATAGATACCTAGATTGCCCATATGAGGGATACGAAGAGATTAATCTAAATGGAAGCGATTTGGATGTTAGTCTCGAAGAAGAAGGCAGCGATGTTAATGGAACATGGGTTCAAGAATACTCCTCAGAATCATTGTTCTCTCTGTCCACTGATTCTAGGAGACCAATTTCAGCAGCTGAAAAAGAAGACAACGAAGTTGACAGCTCCCATGTTACAGAAGAGGAAACTCAAGGAAGGATTCCAGATGTGCTGAATCCTATTGAGAATGTTGTTACACAAGGAGGGAGGGTGGACAAGGCAACATTGCTGAAGCCACTGAAGATGAAGACGAAGAATGATAAAGAAAACATCAACAACTCAGTAGTAGTGGTGCAGGATATTGATGTTGGTATGCCCCCTAGTCCAGAGCATAGTGTGAAGCTGTCAAAGCGCAAAGCAAGGCAGAAGATGAATGACAAAGAGCAAGAAGAAATAATTGGGGTGGACACCAGCCTCTCCAGCTGGTTGGAAGCAGGCACACCCATTTCCATGAAAAGCAACAGTTCTGTGGGAGAAGAACAAACACCAAAAGGAGGAGGAAGAGGGTCACCATGGAGTAATGAGGACAGACCAATACTAGGAGCATTGACGGTTGAAGAGATAAGGATGCATTCTGTAACATCAACATCTTCAAGAAGGTCTAGAAGCAAGAGTCCCGATGAGACACCCATCATAGGTACTGTTGGCAGCTACTGGACTCATACAGGGCAGATCATTGAATCTAACTGGAGCAAAACTGAAAAGGATGCAAAACTAGAGTCCAGTTCTTCAACGTTGAAAACAAGACTGGAAAGAGCATTCGAAGCTAGTGTTTGTGAAGTTTGA 1533 0.4384 MMKCFLPCFRASKRSKHLRSVNATPTEGHQTHVADGASSQLTHQKNVAQSEFEEQSNGSAQVTLNKELIERLEEQEKAAREEDIPQMGEKKDKHGEHDDAGNDNGLLHEEECSESLFSLSIESRKQVSGADKAEAEVNSPMQLCGAAKEECNQIQGKISEGAGVESPTKEAKEGTEVLIVKPEEQQNGIAVMKVNTNEEESAANKLVENNEEKGKARSPKHTEYRYLDCPYEGYEEINLNGSDLDVSLEEEGSDVNGTWVQEYSSESLFSLSTDSRRPISAAEKEDNEVDSSHVTEEETQGRIPDVLNPIENVVTQGGRVDKATLLKPLKMKTKNDKENINNSVVVVQDIDVGMPPSPEHSVKLSKRKARQKMNDKEQEEIIGVDTSLSSWLEAGTPISMKSNSSVGEEQTPKGGGRGSPWSNEDRPILGALTVEEIRMHSVTSTSSRRSRSKSPDETPIIGTVGSYWTHTGQIIESNWSKTEKDAKLESSSSTLKTRLERAFEASVCEV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3526 510 PANTHER - 172 505 - -
Dod01g3526 510 MobiDBLite consensus disorder prediction 395 410 - -
Dod01g3526 510 MobiDBLite consensus disorder prediction 440 463 - -
Dod01g3526 510 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 172 505 IPR039300 GO:0007142
Dod01g3526 510 MobiDBLite consensus disorder prediction 15 108 - -
Dod01g3526 510 PANTHER - 56 158 - -
Dod01g3526 510 MobiDBLite consensus disorder prediction 395 425 - -
Dod01g3526 510 MobiDBLite consensus disorder prediction 67 108 - -
Dod01g3526 510 Coils Coil 62 82 - -
Dod01g3526 510 MobiDBLite consensus disorder prediction 278 300 - -
Dod01g3526 510 MobiDBLite consensus disorder prediction 272 300 - -
Dod01g3526 510 MobiDBLite consensus disorder prediction 18 64 - -
Dod01g3526 510 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 56 158 IPR039300 GO:0007142
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3526 Dod-Chr1 76526605 76528671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3526 - - pvu:PHAVU_006G104900g 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1336 06 17681023 17682684 Dod01g3526 01 76526605 76528671 ECH
Dod01g3526 01 76526605 76528671 Dod01g3526 01 76526605 76528671 ECH
Dod01g3526 01 76526605 76528671 Dod07g0711 07 9967772 9970398 PCT