Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3333 ATGACTTCTCTGAGCAGAGAATTGGTGTTCCTCATACTCCAATTTCTGGAGGAGGAAAAGTTCAAAGAGTCAGTGCACAAGCTTGAGAAAGAATCGGGGTTTTTCTTCAACATGAAATACTTTGAGGAAAAAGTACAAGCTGGTGAATGGGAAGAAGTTGAGAAGTACTTAGCAGGGTTTACCAAAGTTGATGATAATAGATACTCCATGAAAATATTCTTTGAAATCAGGAAGCAGAAATATCTTGAAGCCCTCGATAGGCAAGACAAGGCAAAGGCTGTTGAGATATTAGTTGGTGATTTGAAAGTGTTCTCCACCTTCAATGAGGAACTATACAAAGAAATCACACAGCTGTTAACTCTCAATAATTTCAGGGAGAATGAGCAGCTGTCAAAGTACGGTGACACCAAAACTGCTCGAGGAATTATGTTGATTGAGCTAAAAAAGCTGATTGAAGCAAATCCGCTTTTCCGTGATAAGCTTGTCTTCCCTAGTCTTAAGTCATCAAGATTGCGGACATTAATCAATCAAAGTCTAAACTGGCAGCACCAGCTTTGCAAAAACCCAAGGCCTAACCCAGATATAAAGACTTTATTCACTGATCATACATGTACACCTCCTAATGGTCCTTTAGCACCTACACCTGTCAATCTTCCAGTTGCTGCTGTTGCAAAGCCTGCTGCTTATACTTCACTTGGAGCTCATGGTCCCTTTCCACCTGCTGCAGCAACTGCTAATGCTAATGCTTTGGCTGGTTGGATGGCTAATGCCTCAGCTTCATCATCTGTCCAAGCAGCTGTTGTCACAGCATCAACCATGCCAGTCCCACAGAATCAAGTTGAAATTGTGCTTACTTGGCTAAGTGAGCAGAGCATGTTTTTGGGATTTTGCTTAGGATTGTGCATGGTTCAGTAA 915 0.4175 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLAGFTKVDDNRYSMKIFFEIRKQKYLEALDRQDKAKAVEILVGDLKVFSTFNEELYKEITQLLTLNNFRENEQLSKYGDTKTARGIMLIELKKLIEANPLFRDKLVFPSLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCTPPNGPLAPTPVNLPVAAVAKPAAYTSLGAHGPFPPAAATANANALAGWMANASASSSVQAAVVTASTMPVPQNQVEIVLTWLSEQSMFLGFCLGLCMVQ* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3333 304 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 283 IPR027728 GO:0006355
Dod01g3333 304 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Dod01g3333 304 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Dod01g3333 304 PANTHER PROTEIN, PUTATIVE-RELATED 1 283 - -
Dod01g3333 304 SMART Lish 4 36 IPR006594 GO:0005515
Dod01g3333 304 Pfam LisH-like dimerisation domain 5 33 - -
Dod01g3333 304 SMART ctlh 34 92 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3333 Dod-Chr1 74439063 74441618 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3333 - - gmx:100800771 517.309