Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3326 ATGAGGACAGGGTCCATGATTTTTTCCTTATTGCAAGTACCTAGGTGCAGAATACACAGCTTAGCTAATTATTGGGGTGAAACCTTCCATAGTTTCAGTAAGACTTATGGAAACAATTCCAGTGTCAGGCTGTTTAGTCCTAGAATTTATGGGCTTCAGGGAGGGCACAGAAAAAAGTGGACTAGAAGACCTATATCTACAAATACGGAAGGCACTGGGAGCACCAAATCGAGAAGTTCCAAGAATGAAATTTTGAGTGAACCTTTTTTGACAAGTGCTACAGTAAATGTAAATAAAGCACAGCTAGGTCAATTTGAGGATATTCAATACTGTGACATACAACAAGAGATTGCTCAGAATAAAGACTTGTCTAGCTTAGTCACTGTTATTGTTTTTGATATAGAAACAACTGGGTTAAGCAGAGAGAATGAACGGATCATTGAGATTGCACTTCGAGATCTGCAGGGTGGTGAGAACAGCACTTTCCAAACTCTTGTAAATCCAAAACGCTATGTCCCTAATTCATACATTCATGGTATTACTACCCAGATGGTCAACAGACCTGATGTTCCAAGGATGGAGGAGCTGATTCCCATCTTATTGCACTATGTCCAAAGCCGCCAGAAACCTGGGGGATATGTGTTATGGGTTGCTCATAATGCTCGTTGTTTTGATGTACCTTTCATCATGCATGAGTTACGCCGTTGTTCTACAGAGATTCCTCCTAATTGGTTGTTTGTGGACACCCTTCCTTTAGCACGTGAGCTAATGAAATCTGGAGTTTTAACAGGAACACAACTTTCTTCAACGTCCCTTGCTGCCCTTCGTGATCTCTACAGAGTTAAAGTGGACGGTTCAGCTCATAGGGCCATGGTAGATGTGAACACATTGTCCTTGATACTTCCTAGGTTGACCTCTGATCTGAAGTTGACCCTCTCTGGCCTTGTCAAAAGATCATTCACTGAATCAGATGTTCTCAGCTCTAAGAAGAAAAAGAATTCAGACTAG 1008 0.4147 MRTGSMIFSLLQVPRCRIHSLANYWGETFHSFSKTYGNNSSVRLFSPRIYGLQGGHRKKWTRRPISTNTEGTGSTKSRSSKNEILSEPFLTSATVNVNKAQLGQFEDIQYCDIQQEIAQNKDLSSLVTVIVFDIETTGLSRENERIIEIALRDLQGGENSTFQTLVNPKRYVPNSYIHGITTQMVNRPDVPRMEELIPILLHYVQSRQKPGGYVLWVAHNARCFDVPFIMHELRRCSTEIPPNWLFVDTLPLARELMKSGVLTGTQLSSTSLAALRDLYRVKVDGSAHRAMVDVNTLSLILPRLTSDLKLTLSGLVKRSFTESDVLSSKKKKNSD* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3326 335 MobiDBLite consensus disorder prediction 60 81 - -
Dod01g3326 335 Pfam Exonuclease 130 297 IPR013520 -
Dod01g3326 335 SMART exoiiiendus 128 310 IPR013520 -
Dod01g3326 335 CDD DEDDh 130 301 - -
Dod01g3326 335 Gene3D - 127 313 IPR036397 GO:0003676
Dod01g3326 335 SUPERFAMILY Ribonuclease H-like 128 306 IPR012337 -
Dod01g3326 335 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 332 IPR040393 GO:0008408
Dod01g3326 335 MobiDBLite consensus disorder prediction 65 81 - -
Dod01g3326 335 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3326 Dod-Chr1 74339767 74343651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3326 - - gmx:100799702 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3326 01 74339767 74343651 Dod01g3326 01 74339767 74343651 ECH
Dod01g3326 01 74339767 74343651 Dod06g1819 06 26148023 26153291 PCT