Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3307 ATGAGCTTAGTTTTCGTTACATACCTGTCATTAATGATATGTTTTGGTCTAGTGCTTAATTGCTCACTCTTTGAATTTTACTGGCTTTCACTGTTTTTTCCTTCACCAATTCTTTTCTGGTTTCGGCTAGCGAGACATTTCCCAGCAAATATGTACTCAATCTATAGCTTCCCCGACATTATCATGAGATTAGTCCAGCATCAGCCAACACAGTATCCGACATCAGAGGAGTTGAGTATTGGGAAGATCAAGTTTAAAGCTTTTGATCTTGGGGGTCATCAGATTGCCAGAAGAGTCTGGAAAGATTACTATGCTCAGGTAGATGCAGTTGTCTACTTGGTTGATGCTTATGACAAAGAAAGATTTGCAGAGTCAAAAAAAGAGCTTGATGCTCTCCTCTCCGATGAATCTTTGGCCAATGTCCCTTTCCTTGTCCTTGGAAACAAAATAGATATTCCATATGCCGCCTCAGAAGAAGAGTTGCGATACCATTTGGGACTCACCAACTTCACCACAGGCAAGGGTAAGGTAAATTTATCAGACTCAAATGTCCGCCCCATGGAGGTATTCATGTGCAGTATTGTGAGGAAAATGGGTTATGGAGAAGGCTTCAAATGGCTTTCTCAGTACATCAAATAG 639 0.41 MSLVFVTYLSLMICFGLVLNCSLFEFYWLSLFFPSPILFWFRLARHFPANMYSIYSFPDIIMRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAQVDAVVYLVDAYDKERFAESKKELDALLSDESLANVPFLVLGNKIDIPYAASEEELRYHLGLTNFTTGKGKVNLSDSNVRPMEVFMCSIVRKMGYGEGFKWLSQYIK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3307 212 SMART arf_sub_2 21 212 - -
Dod01g3307 212 Pfam ADP-ribosylation factor family 63 211 IPR006689 GO:0003924|GO:0005525
Dod01g3307 212 PANTHER RE74312P 63 212 IPR006687 GO:0005525|GO:0006886
Dod01g3307 212 SMART sar_sub_1 26 211 IPR006689 GO:0003924|GO:0005525
Dod01g3307 212 PANTHER GTP-BINDING PROTEIN SAR1A 63 212 - -
Dod01g3307 212 ProSiteProfiles small GTPase Arf family profile. 1 211 - -
Dod01g3307 212 ProSiteProfiles small GTPase SAR1 family profile. 1 211 - -
Dod01g3307 212 CDD Sar1 63 211 - -
Dod01g3307 212 Gene3D - 58 212 IPR027417 -
Dod01g3307 212 PRINTS GTP-binding SAR1 protein signature 141 162 IPR006689 GO:0003924|GO:0005525
Dod01g3307 212 PRINTS GTP-binding SAR1 protein signature 185 209 IPR006689 GO:0003924|GO:0005525
Dod01g3307 212 PRINTS GTP-binding SAR1 protein signature 69 93 IPR006689 GO:0003924|GO:0005525
Dod01g3307 212 PRINTS GTP-binding SAR1 protein signature 96 121 IPR006689 GO:0003924|GO:0005525
Dod01g3307 212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 211 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3307 Dod-Chr1 74143377 74145574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3307 K07953 - gmx:100305650 286.96