Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3306 ATGGCTGAGGAGGCAGCAAACGAACGGCGGGTGCTGGTGGCCGTTGATGAAGGCGATGAGAGCATGTGTGCCCTCTCTTGGTGCCTCAAGAACCTCGTTTTCCAAAATTCCAAAGATACCCTTATCCTTCTTTACGTCAAGCCCCCACGTGGCGGCTATACGCTATCATTAGAAGGCACCGATGGACTAGATGATCCTGAATCTCATCAAGGAAGTTTGTTTTCGCCGGAAGTAACCGCAGCCATGGAGAAGTATAGCCAAGAAGTGGCCGATTGCGTCTTGGAAAAAGCCAAGAAACTGTGCAAACATCTCCAACACGTTAAGGTGGAGACGAGGGTAGAGAATGGCGACCCAAGAGACGTGATCTGTGAGATGGCTCAAAAGTTGGCTGCTGATGTTTTGGTTATGGGAAGCCACGGCTATGGTCTCATCAAGAGGACTTTCCTAGGAAGTGTGAGCAGTCACTGCGCACAGAACGTGAAGTGCCCAGTTTTGATAGTCAAGAAGCCAAAACGAAATGCTGGTCCTGAGGACATAGAATCAGAATGA 549 0.4954 MAEEAANERRVLVAVDEGDESMCALSWCLKNLVFQNSKDTLILLYVKPPRGGYTLSLEGTDGLDDPESHQGSLFSPEVTAAMEKYSQEVADCVLEKAKKLCKHLQHVKVETRVENGDPRDVICEMAQKLAADVLVMGSHGYGLIKRTFLGSVSSHCAQNVKCPVLIVKKPKRNAGPEDIESE* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3306 182 CDD USP_Like 10 167 - -
Dod01g3306 182 Pfam Universal stress protein family 9 168 IPR006016 -
Dod01g3306 182 PANTHER OS05G0357525 PROTEIN 1 174 - -
Dod01g3306 182 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 172 - -
Dod01g3306 182 Gene3D HUPs 3 180 IPR014729 -
Dod01g3306 182 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 174 - -
Dod01g3306 182 PRINTS Universal stress protein signature 8 26 IPR006015 -
Dod01g3306 182 PRINTS Universal stress protein signature 146 168 IPR006015 -
Dod01g3306 182 PRINTS Universal stress protein signature 128 140 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3306 Dod-Chr1 74139701 74141458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3306 - - gmx:100527623 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3306 01 74139701 74141458 Dod06g1992 06 31337421 31338674 ECH
Dod01g3306 01 74139701 74141458 Dod01g3306 01 74139701 74141458 ECH
Dod01g3306 01 74139701 74141458 Dod06g1833 06 26290488 26291570 PCT