Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3298 ATGAAAGGAGAAGCAAACTTTTTGGGAGGTGTTGCCTCTGTTAAGGGAGTTAAAGAATTTGATCCTGAAGCTGCAAAAAAGAGGTTCTTCGAAATATATCTAGATAAGTATGCCAAACCAGATTCTGGAATAGGATTTCCCGGTGCCCTTGAGCTCATTGCTGAGTGTAAAAGCAAAGGCCTTAAAGTGGCTGTTGCATCTAGTGCTGATCGTATAAAGGTTGATGCAAATCTAGCTGCCTCTGGTTTGCCATTGTCAATGTTTGATGCAATCGTGAGTGCAGATGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTCTTAGCTGCATCAAAAATATTGGATGTGCTTCCCAGTGAGTGTATAGTTATAGAAGATGCACTAGCTGGAGTTCAAGCTGCCAAAGCTGCTCAAATGAGATGTATAGCTGTTAGGACGACATTGTCAGACGAGGCTTTAGAATCTGCTGGCCCAGCACTTATCCGAGATGACATAGGAAGTATTTCATTTGACGATATTCTCAGTGGCGGTTCTGTTGGATATAATAACAGGGTGCAGGGCTCTGAAACTCTAAATAATTCTGCACAGTATTCATCTGCTATGCTTGATGGAGAAATTGATGATACAGTCGGAAAATCTACCACTGGTAGTGACAAGGGAATATTCTCAACTGAAGGGTTGCAGGGTTCACGACGAGATATTCTGAGATTTGGAAGTCTAGGCATTGCTATCTCTTGCCTTATTTTCACCATAAGTAACTGGAAGGCAATGCAATATGCTTCGCCTAAAGCAATTTGGAATTTGTTGTTTGGTGTTACTCAGCCATCCATGGAACAGAAAGAAGGTGACTCAAGAAATGATAGGATCCAGCAATTTATGAACTACATAACTGATCTGGAGAGCAGGGGAAATGCTAAGATTGTGCCAGATTTTCCGTCTAAACTTGATTGGCTGAATACAGCTCCACTTCAGTTTCGCAGGGATCTGAAAGGAAAAGTTGTTCTTCTGGATTTTTGGACTTACTGTTGTATAAACTGTATGCATGTGTTGCCAGACCTAGATTTTTTGGAGAAAAAATACAAAGATATGCCGTTTATTGTTGTGGGAGTTCATTCAGCAAAGTTTGATAATGAGAAAGATTCTGAAGCCATTCGCAATGCGGTTCTACGCTATGGGATTGCTCACCCGGTTGTGAATGATGGAGACATGTTCCTTTGGCGGAAGTTAGGCATAAATTCATGGCCAACATTTGCTATCATTGGCCCCAATGGTAAACTCCTTGCACAGCTTGCAGGAGAAGGTCACAGGAAGGATCTTGATGATTTTGTGGAGGCAGCACTTCTGTTCTATGGAAAACGTAACATGTTGGACAATACACCAATTACATTGAATTTGGAGAAAGATAATGATCCTCGCATTTCTACATCTCCATTGAAGTTTCCTGGAAAGCTAGCAATTGATGTCCTCAATAACAGGCTTTTTATTTCTGACAGCAACCATAACCGCATAGTGGTTACCGACCTTGATGGAAATTTTATTGTACAAATTGGGAGCAGTGGGGAGGAAGGTTTGCAGGATGGTTCCTTTGATGATGCCACCTTTAACCGCCCTCAGGGCCTTGCTTATAATCCAAAGAAAAATATCCTTTATGTTGCAGACACCGAAAATCATGCTTTGAGGGAAATTGATTTTGTGAATGAGAAAGTGCGTACTCTTGCTGGAAATGGGACCAAGGGCTCTGATTATATTGGAGGAGGAAAAGGAGACACTCAGCCTCTCAATTCCCCTTGGGATGTCTGCTTTCATCCAATGGAAGAGAAAATTTATATTGCCATGGCTGGCCAACATCAGATTTGGGAGCACAATATATCAGACAGAATTACAAAAGTCTTTAGTGGCGATGGCTATGAAAGAAATCTTAACGGATCAAGCTTTACAAGCACATCGTTTGCACAACCTTCCGGTCTTTCATTGTCTCGAGATCTAATGGAGATCTACATCGCTGATAGCGAGAGTAGTTCTATCAGAGCTGTTGATCTGAAAACAGGAGGATCTCGTTTGCTAGCTGGTGGTGATCCAATCTTCCCTGACAATTTGTTTAAGTTTGGTGATCTAGATGGAATAGGCTCTGAAGTACTTCTTCAACATCCATTGGGGGTTACATGTGCAAATGATGGTGAAGTTTATATTGCAGATAGCTACAATCATAAGATCAAGAAATTAGATCCAACAAATAAAAGAGTTAGCACCATTGCAGGGACAGGAAAAGCTGGTTTCAGGGATGGAACGGGAGTAACAGCTCAGCTATCTGAACCGGCAGGAATTGTTGAAGGGAACAACGGGAGACTATTCATAGCCGATACAAACAACAGCTTAATCCGATATCTAGATTTGAACAGTGATAAATTTGAGCTCCGTACCTTGGAACTTAAAGGATTTCAGCCTCCTAAATCAAAACCGAGATCTTTAAAACGTCTCAGAAGACGACCATCAGCTGACACTGTGACCGTTCCCGTAGATGCCATTTCATCAACGGAGGGAAACTTGTCTATTGAAATATCATTGCCAAATGAGTATCATTTCTCAAAGGAAGCACGCAGCAGGATTAGTGTAGATATTGAACCTGAGGATGCTGTTAGTATTGATCCTCCGGATGGATTCCTTAGTCCAGAAGGAACAGCAACCCTTCATTTTAAGAGATCCTCTAACTCAGCTGCAATGGGAAGAATTAATTGCAAGATTTACTATTGCAAGGAAGATGAAGTTTGTTTGTACCAATCATTGCTGTTTGAGGTTCCCTTCCGAGAGGGAGTTCCTAACTCTCCCAAGGCAGACGCCACTCTCGCACATTTTGTGAAGCCCAAAGCTTCGAACAGCAGCTTACTGCAGCCAATTGCCCCCGTGACACCTTGA 2913 0.4192 MKGEANFLGGVASVKGVKEFDPEAAKKRFFEIYLDKYAKPDSGIGFPGALELIAECKSKGLKVAVASSADRIKVDANLAASGLPLSMFDAIVSADAFENLKPAPDIFLAASKILDVLPSECIVIEDALAGVQAAKAAQMRCIAVRTTLSDEALESAGPALIRDDIGSISFDDILSGGSVGYNNRVQGSETLNNSAQYSSAMLDGEIDDTVGKSTTGSDKGIFSTEGLQGSRRDILRFGSLGIAISCLIFTISNWKAMQYASPKAIWNLLFGVTQPSMEQKEGDSRNDRIQQFMNYITDLESRGNAKIVPDFPSKLDWLNTAPLQFRRDLKGKVVLLDFWTYCCINCMHVLPDLDFLEKKYKDMPFIVVGVHSAKFDNEKDSEAIRNAVLRYGIAHPVVNDGDMFLWRKLGINSWPTFAIIGPNGKLLAQLAGEGHRKDLDDFVEAALLFYGKRNMLDNTPITLNLEKDNDPRISTSPLKFPGKLAIDVLNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLQDGSFDDATFNRPQGLAYNPKKNILYVADTENHALREIDFVNEKVRTLAGNGTKGSDYIGGGKGDTQPLNSPWDVCFHPMEEKIYIAMAGQHQIWEHNISDRITKVFSGDGYERNLNGSSFTSTSFAQPSGLSLSRDLMEIYIADSESSSIRAVDLKTGGSRLLAGGDPIFPDNLFKFGDLDGIGSEVLLQHPLGVTCANDGEVYIADSYNHKIKKLDPTNKRVSTIAGTGKAGFRDGTGVTAQLSEPAGIVEGNNGRLFIADTNNSLIRYLDLNSDKFELRTLELKGFQPPKSKPRSLKRLRRRPSADTVTVPVDAISSTEGNLSIEISLPNEYHFSKEARSRISVDIEPEDAVSIDPPDGFLSPEGTATLHFKRSSNSAAMGRINCKIYYCKEDEVCLYQSLLFEVPFREGVPNSPKADATLAHFVKPKASNSSLLQPIAPVTP* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3298 970 SUPERFAMILY NHL repeat 475 802 - -
Dod01g3298 970 CDD NHL-2_like 516 857 IPR045302 -
Dod01g3298 970 SMART LY_2 643 685 IPR000033 -
Dod01g3298 970 SMART LY_2 707 748 IPR000033 -
Dod01g3298 970 SMART LY_2 471 513 IPR000033 -
Dod01g3298 970 Pfam Thioredoxin-like 331 425 IPR012336 -
Dod01g3298 970 Gene3D - 450 623 IPR011042 -
Dod01g3298 970 Gene3D - 697 796 IPR011042 -
Dod01g3298 970 CDD HAD_BPGM-like 31 146 - -
Dod01g3298 970 Pfam Haloacid dehalogenase-like hydrolase 15 144 IPR041492 -
Dod01g3298 970 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 144 IPR006439 -
Dod01g3298 970 SUPERFAMILY HAD-like 19 168 IPR036412 -
Dod01g3298 970 ProSiteProfiles NHL repeat profile. 714 744 IPR001258 GO:0005515
Dod01g3298 970 SUPERFAMILY Thioredoxin-like 306 444 IPR036249 -
Dod01g3298 970 Gene3D - 32 175 IPR023214 -
Dod01g3298 970 Gene3D Glutaredoxin 275 448 - -
Dod01g3298 970 ProSiteProfiles Thioredoxin domain profile. 302 448 IPR013766 -
Dod01g3298 970 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 64 965 - -
Dod01g3298 970 Pfam NHL repeat 714 740 IPR001258 GO:0005515
Dod01g3298 970 Pfam NHL repeat 534 559 IPR001258 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3298 - - aip:107645958 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3298 01 74021210 74039326 Dod01g3298 01 74021210 74039326 ECH