Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3296 ATGGGCTCTGACCAATGTTGCTTCTGGAACGTCCGAGCACACAAAAGTTGTCATTGGAGAGGGTGCTGTTCCCTTGTTTGTGCAGCTTCTCACCTCTGGCAGGCAGTCTGGGCTTTAGGTAATGTTGCTGGTGACTCCCCAGCCTGTAGGGATCTTGTTCTGAGCCATGGTGCACTCTTGCCGTTATTGTCTCAGCTGAATCAACATTCAAAATTATCTATGTTGAGGAATGCTACATGGACTTTATCTAATTTCTGCCGTGGAAAGCCTCCAGCACCTTTTGAACAGGTAAAGCTGGCCTTGCCTGTTCTTCGGGACCTCATTTACTTGAACGATGACGAAGTTCTAACAGATGCCTGCTGGTCTCTCTCTTACCTTTCAGACGGCCCAAATGAAAAAATTCAAGCTGTAATTGAAACAGGAGTGTGTCCACGGCTTGTGGAGCTTCTGCTGCATCCATCACCTACAGTTCTCATACCAGCTCTTCGAACTATAGGAAATATTGTTAGTGGTGATGATGCTCAGACTCAGTTTGTAATCGACAATGGAGTGCTCCCCTGTCTTCACCAACTTCTTACACAAAATCACAAAAAAAGCATCAGGAAAGAAGCTTGTTGGACAATTTCAAACATCACAGCTGGAAATAGAGCTCAAATACAGGGTGTCATTGAGGCCAACATCATTCTTCCTCTCGTCCAACTTCTTCAGCATGCAGAATTTGATATCAAGAAGGAGGCTGCGTGGGCCACCTCGAATGCAACTTCTGGAGGATCCCGTGATCAGATTCAGATCCTGGTGAGTCAAGGTTGCATAAAGCCACTATGTGATCTCTTTACGTGTCCGGATCCGAGGATTGTGACAGTGTGTCTTGAGGTGCTGGACAACATCTTAAAGGTCGGAGAAGCTGACAAAAAAATGGGACTAAATGATGGGATCAACATTTACGCTCAAATGGTTGATGAATGCGAAGGACTGGAGAAGATTGAGAATTTGCAGACTCATGACAACAATGAGATTTATGAGAGGGCTGTGAAAATTTTGGAGAGGTATTGGGCTGAGGATGAATTGGAAGTAGAACATAATCTTCAGAATGGTGGGGATGCTACTCACCAAGGTTTTTCTTTTGGTACTAACCAGCCCAACCTCCCCCCGGCTGGTTTTAATTTTGGCTAA 1173 0.4518 MGSDQCCFWNVRAHKSCHWRGCCSLVCAASHLWQAVWALGNVAGDSPACRDLVLSHGALLPLLSQLNQHSKLSMLRNATWTLSNFCRGKPPAPFEQVKLALPVLRDLIYLNDDEVLTDACWSLSYLSDGPNEKIQAVIETGVCPRLVELLLHPSPTVLIPALRTIGNIVSGDDAQTQFVIDNGVLPCLHQLLTQNHKKSIRKEACWTISNITAGNRAQIQGVIEANIILPLVQLLQHAEFDIKKEAAWATSNATSGGSRDQIQILVSQGCIKPLCDLFTCPDPRIVTVCLEVLDNILKVGEADKKMGLNDGINIYAQMVDECEGLEKIENLQTHDNNEIYERAVKILERYWAEDELEVEHNLQNGGDATHQGFSFGTNQPNLPPAGFNFG* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3296 390 Gene3D - 25 352 IPR011989 -
Dod01g3296 390 PANTHER IMPORTIN SUBUNIT ALPHA 33 378 - -
Dod01g3296 390 PANTHER IMPORTIN ALPHA 33 378 - -
Dod01g3296 390 Pfam Armadillo/beta-catenin-like repeat 131 169 IPR000225 GO:0005515
Dod01g3296 390 Pfam Armadillo/beta-catenin-like repeat 217 254 IPR000225 GO:0005515
Dod01g3296 390 Pfam Armadillo/beta-catenin-like repeat 172 213 IPR000225 GO:0005515
Dod01g3296 390 Pfam Armadillo/beta-catenin-like repeat 259 296 IPR000225 GO:0005515
Dod01g3296 390 Pfam Armadillo/beta-catenin-like repeat 46 87 IPR000225 GO:0005515
Dod01g3296 390 Pfam Atypical Arm repeat 313 360 IPR032413 -
Dod01g3296 390 SMART arm_5 46 87 IPR000225 GO:0005515
Dod01g3296 390 SMART arm_5 172 213 IPR000225 GO:0005515
Dod01g3296 390 SMART arm_5 89 128 IPR000225 GO:0005515
Dod01g3296 390 SMART arm_5 215 255 IPR000225 GO:0005515
Dod01g3296 390 SMART arm_5 258 298 IPR000225 GO:0005515
Dod01g3296 390 SMART arm_5 130 170 IPR000225 GO:0005515
Dod01g3296 390 SUPERFAMILY ARM repeat 32 353 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3296 Dod-Chr1 73978697 73984078 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3296 K15042 - jre:108987897 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3296 01 73978697 73984078 Dod01g3296 01 73978697 73984078 ECH