Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3293 ATGAAACCATCCTCTAGGATTCTCATTGGCTGCAAGAATTCATCGTTTCTTGCAAGAAGTCACCACGGTACTCGTACAATGTGTAATCCTTCCGCAGGTCTCAATCTTGATCACAACAACATTCTCCACCCTTTCCGCTTGTTGGGGTTCGCACGTACAGTGAATGGTAGCCACCATGTTTTTGGGTCACCCTCTTCGAGTTTTGGCCATTCAAGGATAACCATAACCAGTTTAAGCGCAACAAGAACAAACGGTAAAGATAATGTCTCTACCATTGCTGAGGTTGCCTTCAAGGCTCGAAACCTGTCAACCTCCTCCTTTGAGACACGTGTCAGTAATGAGAACAACAATCTTGAAAGTAGTGTTTACGTAAAGGGTGACATGGATGTGAGGCCATTGGTGGTTGAAAGAACGGATAAAGAAGAGGAAGAATCTCGGTCAGGAGTCGTTGGTGACGAAGAAGATAATGCAAGATCAGAGAATTCATCACGTGGTTTGAATAATAATAAGGTATGTGATGAGGGTGTGAATGTGGCTTCGAACAAGAACATTAATGTTGAGGATGAGGAGGAGACAGAGGTGGAGAAAAAGGCGTGGAGGTTGTTGCAGGAGGCGCTTGTGACGTATTGTGACACCCCTGTGGGGACGGTGGCGGCAAATGATTCAAGTGACGAGCACGCCTTGAATTATGATCAGGTCTTTATTCGGGATTTCGTTCCTTCCGCCCTTGCTTTCTTGCTCAAGGGAGAAAAAGAGATTGTCAAGAATTTTCTCCTTCGCACCTTGCAACTACAGAGTTGGGAGAAAACGGTGGACTGCTATAGCCCAGGACAGGGCTTGATGCCTGCAAGCTTCAAAGTTAAAACCATGCAGGTTGATGAAGAAAAGGTAGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCGCCTGTAGATTCAGGATTGTGGTGGATCATCTTGCTGCGGGCTTATGGGAAGCTCACTGGTGACTACAGCTTGCAAGAAAGGGTGGATGTTCAAACAGGCTTACAGATGATCCTTAACTTGTGTTTAACGGATGGCTTTGATATGTTCCCTTCTCTCTTAGTAACTGATGGGTCTTGCATGATAGACAGGAGGATGGGTACTCATGGTCACCCACTTGAGATTCAAGCGTTGTTTTACTCAGCTCTTCGCTCCTGCCGTGAGATGATTAAGGTAGATGATGGATCCAAGAATCTGGTTGGAGAAATTAACAACAGGCTCAGTGCACTGTCATTCCACGTTAGAGAATATTATTGGTTGGATATGAGAAGGGTGAACGAGATATACAGGTACAAGACAGAAGAATACTCAATGGATGCCACAAACAAGTTCAACATATATCCAGAACAAATTCCTATGTGGCTAATGGATTGGATTCCAGAGGAAGGAGGGTATCTGATAGGGAACCTGCAACCAGCTCACATGGATTTCAGGTTTTTCATGCTTGGAAACCTTTGGTCCATTGTTTCATCTTTGGGTACCCCAAGACAGAATAAGTCTATCTTGAATTTTATAGAGGCAAAATGGGATGATCTCGTGGGGCACATGCCACTTAAGATATGCTATCCTGCCTTGGAGTCTGATGAATGGCGCATAATTACTGGCAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGGTCTTGGCCAACCCTTCTGTGGCAGTTCACACTGGCATGCATCAAAATGGGGAGAACTGAATTGGCTCAGGAAGCAGTTGCTTTGGCTGAGAAAAGGCTGCCAGTGGATTCATGGCCTGAATATTATGACACACGCACAGGAAAGTTTATTGGGAAACAAGCCAGGCTTTACCAAACATGGACATTAGCTGGGTTCCTTGCATCTAAGATGTTCTTGAAGAATCCTGAAACGGCATCCTTGTTATGCTGGGAAGAGGATTTTGAGATCCTTGAAACTTGTGTGTGTGCACTTAGCAAGAGTGGCAGGGCTAAATGCTCCCGTGATGCTGCCAAGTCTCAGATTCTCGTCTGA 2037 0.4512 MKPSSRILIGCKNSSFLARSHHGTRTMCNPSAGLNLDHNNILHPFRLLGFARTVNGSHHVFGSPSSSFGHSRITITSLSATRTNGKDNVSTIAEVAFKARNLSTSSFETRVSNENNNLESSVYVKGDMDVRPLVVERTDKEEEESRSGVVGDEEDNARSENSSRGLNNNKVCDEGVNVASNKNINVEDEEETEVEKKAWRLLQEALVTYCDTPVGTVAANDSSDEHALNYDQVFIRDFVPSALAFLLKGEKEIVKNFLLRTLQLQSWEKTVDCYSPGQGLMPASFKVKTMQVDEEKVEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDVQTGLQMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGTHGHPLEIQALFYSALRSCREMIKVDDGSKNLVGEINNRLSALSFHVREYYWLDMRRVNEIYRYKTEEYSMDATNKFNIYPEQIPMWLMDWIPEEGGYLIGNLQPAHMDFRFFMLGNLWSIVSSLGTPRQNKSILNFIEAKWDDLVGHMPLKICYPALESDEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRTELAQEAVALAEKRLPVDSWPEYYDTRTGKFIGKQARLYQTWTLAGFLASKMFLKNPETASLLCWEEDFEILETCVCALSKSGRAKCSRDAAKSQILV* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3293 678 MobiDBLite consensus disorder prediction 135 160 - -
Dod01g3293 678 Gene3D - 216 623 IPR012341 GO:0005975
Dod01g3293 678 PANTHER ALKALINE/NEUTRAL INVERTASE 1 678 - -
Dod01g3293 678 Pfam Alkaline and neutral invertase 198 637 IPR024746 GO:0033926
Dod01g3293 678 MobiDBLite consensus disorder prediction 135 172 - -
Dod01g3293 678 SUPERFAMILY Six-hairpin glycosidases 195 629 IPR008928 GO:0005975
Dod01g3293 678 PANTHER - 1 678 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3293 Dod-Chr1 73949799 73952943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3293 - - gmx:100794258 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3293 01 73949799 73952943 Dod06g1863 06 26834687 26838934 ECH
Dod01g3293 01 73949799 73952943 Dod01g3293 01 73949799 73952943 ECH
Dod01g3293 01 73949799 73952943 Dod06g1863 06 26834687 26838934 PCT