Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3288 ATGGCCCCTGATATCAAAACCGTTACCAGCAATGCTATCACTGAGCAAGCCAACAAGGCCTCCGGACGTGCCTTCGTGACATTCCTTGCCGGAAACGGTGACTACGTCAAGGGTGTTGTGGGTTTGGCCAAAGGCTTGAGGAAGACCAAGACCCTCTACCCTTTGGTTGTTGCAGTCCTCCCAGATGTTCCTGAGGAGCACCGCAGCATCCTTCACTCCCAAGGTTGCATTGTCAAAGAGATAGAACCCGTCTACCCACCTGAGAACCAGACCCAGTTTGCCATGGCCTACTACGTCATCAATTACTCTAAGCTGCGTATTTGGGAGTTCGTGGAGTACAGCAAGATGATCTACCTAGATGGTGACATCCAAGTTTTTGAGAACATTGACCACCTGTTTGATCTGCCTGACAACTATTTCTATGCTGTGATGGACTGTTTCTGCGAGAAGTCATGGAGCAAGACCCCTCAGTATCAGATTGGCTACTGCCAACAGTGCCCTGACAAGGTTCAATGGCCCTCTGAGTTTGGTCCCAAGCCTCCTCTCTATTTCAATGCTGGCATGTTTGTCTATGAGCCTGATTTGGCCACCTACCGTGACCTCCTTAAAACTGTCCAAGTCACCGAGCCAACCTCCTTTGCTGAACAGGACTTTCTGAACATGTACTTCAAGGACAAGTACAGGCCCATATCTAATGTGTACAACCTTGTGCTGGCTATGTTATGGCGTCACCCTGAAAATGTTGAAGTTGACAAAGTCAAAGTGGTTCACTACTGTGCTGCGGTGAGTATTATAAATTCATCAAATTCTGTTGCATTTTCCGTGTCCAAATTCTGTAAGGTTGGACAAAATGATGTTTTTATATCAATTTATGTTAAACTACAGGGGTCTAAGCCTTGGAGGTACACCGGAGAAGAGGAGAACATGGACAGAGAAGATATCAAGATGTTGGTGAAGAAATGGTGGGACATATACGAGGATGAGTCACTAGATTACAACAACATCATGGAAGGCTTCACGAAGGCGCTTTTGGAGGCACCTGGCGTGAAGTTTGTGCCTGCCCCATCTGCCGCCTAA 1077 0.4726 MAPDIKTVTSNAITEQANKASGRAFVTFLAGNGDYVKGVVGLAKGLRKTKTLYPLVVAVLPDVPEEHRSILHSQGCIVKEIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDNYFYAVMDCFCEKSWSKTPQYQIGYCQQCPDKVQWPSEFGPKPPLYFNAGMFVYEPDLATYRDLLKTVQVTEPTSFAEQDFLNMYFKDKYRPISNVYNLVLAMLWRHPENVEVDKVKVVHYCAAVSIINSSNSVAFSVSKFCKVGQNDVFISIYVKLQGSKPWRYTGEEENMDREDIKMLVKKWWDIYEDESLDYNNIMEGFTKALLEAPGVKFVPAPSAA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3288 358 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 331 IPR029044 -
Dod01g3288 358 PANTHER GLYCOGENIN SUBFAMILY MEMBER 286 337 - -
Dod01g3288 358 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 263 - -
Dod01g3288 358 CDD GT8_Glycogenin 23 327 - -
Dod01g3288 358 Pfam Glycosyl transferase family 8 27 260 IPR002495 GO:0016757
Dod01g3288 358 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 260 IPR029044 -
Dod01g3288 358 PANTHER GALACTINOL SYNTHASE 2 286 337 IPR030515 GO:0006012|GO:0047216
Dod01g3288 358 PANTHER GALACTINOL SYNTHASE 2 1 263 IPR030515 GO:0006012|GO:0047216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3288 Dod-Chr1 73925416 73927434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3288 1 358 Glycosyltransferase AT1G56600 67.568 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3288 K18819 - gmx:100800249 569.696