Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3286 ATGGGTTCCGGTTGTGGCGGTCACTCTCACTCTCACTCTCGCACTCACAATCGAGGTGGTCTTGGTGCATTCTCATCGGTGATTCTGTTACCGTTGTTGATCTATTCTTCAGCTGTGGGAGCTCTGGGAGGGTGCGATAAGGCTGCAGCGATATTCGTGTTCGGGGATTCGAACTCGGACACGGGTGGACTCGTTTCCGGACTCGGTTTTCCCGTAAACCTCCCCAATGGGCGCACCTTCTTCCACAGATCCACCGGTCGCTTGTCCGATGGACGCCTCATCCTCGACTTCCTCTGCCAAAGTTTGAACATAAGTTTTTTGAACCCATACTTGGATCCATTGTCTGGCTCTACATTCTCAAATGGAGCAAACTTTGCAGTGATAGGGTCTGCTACCCTCCCCAAATATGTTCCTTTCTCTTTAAATATACAAGTTATGCAGTTCCGGCATTTCAAAGCTCGTACCCTTGAACTTGTTACTGCAGGTGCAAGAAATTTGATCAATGATCAAGGCCTCCGGGATGCGCTCTACTTGATTGATATCGGACAAAATGACCTTGCTGATTCATTTTTCAAAAACATGTCATATGCACAAGTGATCAAGAGGATCCCAACAGTTATCACTGAAATTGAGAATGCTGTTAAGACTTTGTATGATGAAGGTGCCAGGAAGTTTTGGGTTCACAATACAGGGCCCTTGGGCTGTCTTCCTAAAATACTCGCATCGGCTGAGAAGAAGGATCTGGATTCATCTGGATGTCTTTCTAGTTATAACTCTGCTGCAAGATTGTTTAATGAAGCACTGAATCATTTGATTCAGACACTAAGAACTCAATTAAAGGGTGCTACTATAGTCTATGTCGATATTTATGCCATCAAATATGACCTCATCACAAATGCTGCCAAATATGGTTTCTCAAATCCGTTGATGGTATGCTGCGGCCATGGAGGACCTCCTTACAATTTTGACGCAAGGGTGACATGTGGTCAACCTGGCTATCAGGTTTGTGATGAAGGGTCTCGGCATGTTAGCTGGGATGGAATCCATTATACTGAGGCTGCAAATACATTCATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCACATACACCTTTTGAATTCTTCTGCCGTCATTGA 1143 0.4497 MGSGCGGHSHSHSRTHNRGGLGAFSSVILLPLLIYSSAVGALGGCDKAAAIFVFGDSNSDTGGLVSGLGFPVNLPNGRTFFHRSTGRLSDGRLILDFLCQSLNISFLNPYLDPLSGSTFSNGANFAVIGSATLPKYVPFSLNIQVMQFRHFKARTLELVTAGARNLINDQGLRDALYLIDIGQNDLADSFFKNMSYAQVIKRIPTVITEIENAVKTLYDEGARKFWVHNTGPLGCLPKILASAEKKDLDSSGCLSSYNSAARLFNEALNHLIQTLRTQLKGATIVYVDIYAIKYDLITNAAKYGFSNPLMVCCGHGGPPYNFDARVTCGQPGYQVCDEGSRHVSWDGIHYTEAANTFIASKILSMAYSTPHTPFEFFCRH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3286 380 CDD SGNH_plant_lipase_like 50 364 IPR035669 -
Dod01g3286 380 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 29 379 - -
Dod01g3286 380 Gene3D SGNH hydrolase 46 368 IPR036514 -
Dod01g3286 380 Pfam GDSL-like Lipase/Acylhydrolase 51 362 IPR001087 GO:0016788
Dod01g3286 380 SUPERFAMILY SGNH hydrolase 51 364 - -
Dod01g3286 380 PANTHER OS01G0329900 PROTEIN 29 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3286 Dod-Chr1 73866009 73869216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3286 50 369 Acyl Lipid Metabolism Gene Families AT4G10950 27.859 1.37e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3286 - - gmx:100790553 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3286 01 73866009 73869216 Dod01g3286 01 73866009 73869216 ECH