Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3269 ATGGCCTCCAACAACCACCACACCGAAAACCACCTCAACGGTGGTGACTCCACTCCCCGCGCACCCAAAAAGCCTAAGCTCTCATCCTCCTCTTTCATCACTGGCTCCGAGATTGAATCGGAGTTCTCCCACCACGACCCCGCCGTCGCCCGCATCAACAACGGCAGCTTCGGATGCTGCCCCGCCTCCGTCATGGCCGCCCAGCACCAGTGGCAGCTCAACTACCTCAGCCAGCCCGACCACTTCTACTTCAACGTCCTCAAGGATGCCATCCTCCATTCCCGCACCATGATCAGGGCCCTCGTCAACGCCCGCCACGTCGACGAGATCTCCATTGTCGACAACGCCACCACCGCCGCCGCCATCGTCCTCCAGGACACCGCCTGGTCCTTCCACGAAGGAACCTTCCAGAAGGGCGACGTCGTCCTCATGCTCCATTACGCCTACGGCGCCGTCAAGAAGTCCATGGAGGCTTACGTTACCCGCGCCGGTGGCCACGTCATCGAGGTACCCCTCCCTTTCCCCGTAACCTCCAACGACGAAATCGTGACCGAATTCCGAAAGGCTCTGGAGAGGGGAAAGAGCAGTGGGAAGAGGGTTAGGTTAGCTGTTATTGATCATGTTACTTCCATGCCGTGTGTTGTGATTCCTGTTAAGGAATTGGTGAAGATTTGTAGGGAGGAAGGTGTTGACCGTGTGTTTGTTGATGCTGCTCATTCAATTGGGTGCACTGATGTTGATATGGAAGAGATTGGTGCTGATTTTTATACCAGCAATTTGCATAAGTGGTTCTTTTGCCCTCCTTCGATTGCGTTTTTGTATAGCAGGAAAACCACCCCTAAGGGTGGGGGTGGGGGTGGTGGTGGTTCTGATTTGCACCATCCTGTGGTGTCTCATGAGTATGGCAATGGTTTGGCTGTTGAGAGTGCCTGGATTGGGACCAGGGACTATAGTGCTCAATTAGTGGTTCCCGCGGCTTTGGATTTCGTTAATAGGTTTGAAGGGGGAATTGAAGGGATCAAAAAGAGGAACCATGATGCTGTTGTGGAGATGGGGCAAATGCTGGCTGAAGCGTGGGGGACTCATCTTGGTTGTCCTCCGGACATGTGTGGTAGCATGATAATGGTGGGTTTGCCTGCTTCTTTGGGGATTGCTAGTGATGATGATGCTCTCAGGTTGAGGAAGCATTTTAGGGAAGATTTTGGGGTTGAAGTTCCCATATATTATCGGCCGCCGAGAGATGAGGAAGGTGGGCCAGTAACTGGATATGCCAGGATTTCTCATCAAGTCTACAACAAAGCTGATGACTATTACAAGTTCAGGGATGCAGTTAACCAACTTGTGCAGAATGGATTTACCTGTGCCCTTCTTTCAGGCTGA 1380 0.5283 MASNNHHTENHLNGGDSTPRAPKKPKLSSSSFITGSEIESEFSHHDPAVARINNGSFGCCPASVMAAQHQWQLNYLSQPDHFYFNVLKDAILHSRTMIRALVNARHVDEISIVDNATTAAAIVLQDTAWSFHEGTFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGHVIEVPLPFPVTSNDEIVTEFRKALERGKSSGKRVRLAVIDHVTSMPCVVIPVKELVKICREEGVDRVFVDAAHSIGCTDVDMEEIGADFYTSNLHKWFFCPPSIAFLYSRKTTPKGGGGGGGGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAALDFVNRFEGGIEGIKKRNHDAVVEMGQMLAEAWGTHLGCPPDMCGSMIMVGLPASLGIASDDDALRLRKHFREDFGVEVPIYYRPPRDEEGGPVTGYARISHQVYNKADDYYKFRDAVNQLVQNGFTCALLSG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3269 459 Pfam Aminotransferase class-V 70 364 IPR000192 -
Dod01g3269 459 MobiDBLite consensus disorder prediction 1 30 - -
Dod01g3269 459 SUPERFAMILY PLP-dependent transferases 45 449 IPR015424 -
Dod01g3269 459 MobiDBLite consensus disorder prediction 1 15 - -
Dod01g3269 459 PANTHER L-CYSTEINE DESULFHYDRASE 13 458 - -
Dod01g3269 459 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 13 458 - -
Dod01g3269 459 Gene3D - 64 332 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3269 Dod-Chr1 73736751 73739865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3269 K22207 - gmx:100786129 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3269 01 73736751 73739865 Dod01g3269 01 73736751 73739865 ECH
Dod01g3269 01 73736751 73739865 Dod06g1886 06 27311542 27315135 PCT