Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3243 ATGGAAGCCATTCGTGGAGGAAGTTCTCCTGCTCCAACAACAAAAGGAAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTATGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTCTGCATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGCTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGCGGTCATAAAGGATCAATCTCTTGCTTGATGTCTTTCATGGCTGCTTCTGGTGAGGCTCTTTTGGTTTCGGGTGCTAGTGATGGATTGCTCATAATTTGGAGCGCTGACCAGGGGCCAGATTCACGTGAACTTGTTCCCAAGCTGAGTTTAAAAGCACATGACGGCGGGGTTGTGGCAGTTGAGCTGTCTAGGGTGATGGGAGGTGCTCCTCAGCTAATTACAATTGGTGCAGATAAGGCATTGGCAATATGGGACACAGTCTCCTTTAAGGAACTGCGGCGTATCAAGCCAGTTCCGAAATTGGCCTGCCACAGTGTGGCTTCTTGGTGTCATCCTCGAGCTCCAAACCTCGATATTCTAACCTGCGTCAAAGATTCCCATATATGGGCAATTGAACATCCGACTTATTCTGCTCTCACAAGGCCATTGTGCGAATTGACCACAGTTATTCCTCCACAAGCTCTTGCTCCTAATAAGAAACTAAGGGTTTATTGTATGACCACACATACTCTGCAACCACATCTTGTTGCTACCGGAACCAATATTGGTGTTATTATCTGCGAGTTTGACACTAGGTCTCTTCCACCTGTAGCTCCCCTACCAACCCCATCAGACAGCAGAGAGCATTCTGCTGTATTTGTAATTGAAAGGGAACTAAAGCTATTAAACTTTCAGTTAAACAACTCAGCAAATCCATCTCTTGGAAATAATAGCTCCTTGCCCGAAACTGGAAGATCAAAGGGAGATTTTTTTGAACCGTTGCCTGTCAAGCAAGGGAAGAAGCACATTAGTACACCTGTTCCACATGATTCATACTCAGTTCTTTCCGTGAGCAGTTCTGGAAAGTATCTTGCAGTTGTTTGGCCGGATATTCCTTATTTTTCTATCTACATGGTTAGTGATTGGTCAATTGTTGACTCCGGCAGTGCAAGGCTTCTTGCTTGGGATACATGTCGTGACAGATTTGCTATATTAGAATCAGCAGCACCTCCTAGAATTCCTGTGATTCCCAAGGGTAGTTCATCAAGAAGAGCAAAAGAGGCTGCTGCCGCACAAGCAGCAGCAGCAGCTGCTGCTGCAGCTTCCACAGCTTCTGTTCAAGTCCGCATCTTGTTAGACGATGGAACATCAAATATACTAATGAGGTCTGTTGGTACACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGCGTTGCCTATCGAACATCTAGGAGAGTCAGTCCTATTGCTGCTACAGCTATTTCAACAATTCAGTCCATGCCCTTATCAGGTTATGGAAGCAGTGGTCTTTCTTCATTTTCTACTTACGATGATGGATTTTCTTCATATAGATCTCCAGCTGAGGCAGCACCTCAAAACTTCCAGCTGTACAGTTGGGAGACATTCCAGCCTGTGGGCGGTTTACTTCCCCAGCCAGAATGGACTGCTTGGGACCAGACCGTCGAATACTGTGCATTTGCATACCAGCAATACATAGTCATATCATGTTTGCGCCCTCAATATAGATACCTGGGAGATGTTGCAATCCCATACGCTACTAGTGCTGTTTGGCACCGGAGGCAATTGTTTGTGGCTACACCAACTACTATAGAAATTGTTTTTGTGGATGCTGGGGTTGCACAAATTGACATTGAAACTAAGAAGATGAAAGCAGAGCAGAAAATGAAAGAAGCACAGACAAGTGCAGTTGCAGAGCACGGAGAGTTAGCACTTATTACAGTAGATGGTCCCCAAGCTACGTCAGAAGAAAGAATATCATTAAGGCCGCCAATGCTGCAGGTAGTTCGATTGGCTTCATTTCAGCATGCTCCTTCAGTGCCTCCTTTCTTAACATTGCCAAAACAATCTAGAGTTGACAGTGATGACTCTTGGGCAAAAGAAGCTGAAGAGAGAAAGGCTAGTGAGGTGGCTGTTGGTGGTGGGGGTGTGTCTGTGGCAGTTACCCGTTTTCCAATGGAACAAAAACGCCCAGTTGGGCCTCTTGTTTTGGTAGGTGTAAGAGATGGAGTTCTTTGGCTAATTGACAGGTATATGTGTGCTCATGCCTTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTCAGTGCAGTAAAATGGGCAAGTAGGCTTGGGAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGGATGGGCTATGCCAATGAAGCACTTCATTTGCCTGGAATATCTAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTTCAGTGTCTTATTACCATGAGTAATAGCAGGGATATAGGAAATGATAGTACCGGGCTTGGTTTGAATGACATTCTTAATTTATCAGATAAAAAGCCAGATAAAAAGCAAGATCAAGTTGAAGGTGTTCAGGCCCTTCAGGGTATAGTGAAATTTGCAAAAGAGTTCTTGGATCTTATCGACGCCGCTGATGCTACTGCACAGGTTGAAATTGCTCGTGAAGCTCTCAAGAGGTTAGCTGTAGCAGGTTCCGTGAAAGGTACTTTACAAGGTCATGAGCTGAGAGGGTTAGCATTGCGCCTTGCTAATCATGGAGAGTTGACTCGGCTAAGTGGTTTGGTAAACAACTTAGTCACACTTGGTTTGGGACGGGAAGCTGCATTTGCTGCTGCTGTTTTGGGAGACAATGCTCTAATGGAAAAAGCATGGCAGGATACTGGCATGCTGGCTGAGGCTGTGCTTCATGCTCATGCACACGGACGTCCAACTTTGAAGAACTTGGTTCAGGCCTGGAACCAAATGCTACAGAGAGAGATTGAGCCTACTCCATCACAGAAGACAGATGCTACAGCTGCATTTTTAGCTTCTCTTGAGGAGCCTAAGCTTACAAGTTTGGCAGAAGCAGGGAAGAAACCGCCTATCGAAATCTTACCTCCAGGTATGATGTCTCTGGATGCTCCTATTTCCATCCAGAAAAAGCCAGCATCTGCTGCTCAGAATTCACAACCACCACCAGGCAAGCCATTGGCACTTACAGCGCCTCCTGCAACCACAGCAATGCCAGAGGGTGCAACACAGCAGCCTGAATCCACGCCTCCTGCACCAGTTAGCAACCCACCTCCATCAGAATCTACCTCAGACTCTCCGCCTGCTCCAGAGGCTACTCCACCTCAACCAGAGTCAGTTGAAACCAAGGTAGAAAATGGAGGTCCTACCTCCGCACCAGTAAGCGAAGGTGGTGATCCAATTGCTAGTGGGGAAAATGTTCAAGCAGTGTCGCCGAGCAATCCAGCACCACCCGAGACTCCATCACCAGTAGCAGAGGCTCCTGAAACAGAGGCTCCCGAAACAAATGTTCCTATTGCAGTACCTGCGAGTGACCAGCAAGTATGA 3672 0.4624 MEAIRGGSSPAPTTKGRHFLVICCLNKAIFMDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDAPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADQGPDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKALAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPQALAPNKKLRVYCMTTHTLQPHLVATGTNIGVIICEFDTRSLPPVAPLPTPSDSREHSAVFVIERELKLLNFQLNNSANPSLGNNSSLPETGRSKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAVVWPDIPYFSIYMVSDWSIVDSGSARLLAWDTCRDRFAILESAAPPRIPVIPKGSSSRRAKEAAAAQAAAAAAAAASTASVQVRILLDDGTSNILMRSVGTRSEPVIGLHGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSGLSSFSTYDDGFSSYRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISCLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKMKAEQKMKEAQTSAVAEHGELALITVDGPQATSEERISLRPPMLQVVRLASFQHAPSVPPFLTLPKQSRVDSDDSWAKEAEERKASEVAVGGGGVSVAVTRFPMEQKRPVGPLVLVGVRDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYANEALHLPGISKRLEFDLAMKSNDLKRALQCLITMSNSRDIGNDSTGLGLNDILNLSDKKPDKKQDQVEGVQALQGIVKFAKEFLDLIDAADATAQVEIAREALKRLAVAGSVKGTLQGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREIEPTPSQKTDATAAFLASLEEPKLTSLAEAGKKPPIEILPPGMMSLDAPISIQKKPASAAQNSQPPPGKPLALTAPPATTAMPEGATQQPESTPPAPVSNPPPSESTSDSPPAPEATPPQPESVETKVENGGPTSAPVSEGGDPIASGENVQAVSPSNPAPPETPSPVAEAPETEAPETNVPIAVPASDQQV* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3243 1223 PANTHER TSET COMPLEX MEMBER TSTF 6 1178 - -
Dod01g3243 1223 SMART WD40_4 84 127 IPR001680 GO:0005515
Dod01g3243 1223 SMART WD40_4 136 178 IPR001680 GO:0005515
Dod01g3243 1223 PANTHER BNAC07G49640D PROTEIN 6 1178 - -
Dod01g3243 1223 SUPERFAMILY WD40 repeat-like 43 393 IPR036322 GO:0005515
Dod01g3243 1223 Gene3D - 9 381 IPR015943 GO:0005515
Dod01g3243 1223 MobiDBLite consensus disorder prediction 1125 1150 - -
Dod01g3243 1223 Gene3D - 790 1045 - -
Dod01g3243 1223 MobiDBLite consensus disorder prediction 1084 1223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3243 - - gmx:100786844 1994.16