Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3242 ATGGCTCCGACTCTTGTGCACCTTGCGACTTTATTCTTAGCTTTATCCGCTTATTATCTTCAGAGCGCTGGGGCGGAAGAAGCACAGCACCTTACTGCTCTCAAGCTTAACTCTCGTATTCTTCAGGAGTCTATTGCTAAACAGATCAACGAAAACCCAGAGGCGGGATGGGAGGCTGCTATAAATCCTCGATTCTCCAATTATACGGTTGGACAATTCAAGCGCCTTCTTGGGGTTAAACCAACGCCTAAGAAAGAACTCAGAGCTACACCTGTTGCATCTCATCCAAAATCATTGAAATTGCCAAAGAATTTTGATGCAAGGACAGCATGGTCACAGTGTAGCACTATTGGAAGAATTCTAGGTCATTTGCGTGCTCCTTCTCCTTTAGGTCACTGTGGTTCTTGTTGGGCATTTGGTGCCGTTGAATCATTATCAGATCGATTTTGCATTCATTATGATGTGAATATCTCTCTCTCAGTTAATGACCTTCTCGCATGCTGTGGCTTTATGTGTGGATCTGGCTGTGATGGGGGATATCCCATATATGCATGGCGATACTTAAAAAGCCATGGTGTTGTCACTGAAGAGTGTGACCCATACTTTGATCAAATTGGCTGTTCTCATCCTGGTTGTGAGCCAACGTACAGTACTCCCAAATGTGTTAGGAAGTGTGTGGATGGGAACCTGCTTTGGAAGAAGTCAAAGCACTACAGTGTCAATGCATATAGGATCAACTCTGATCCCTATGATATCATGGCAGAAGTCTATAAGAATGGACCAGTTGAAGTTGCATTTACTGTTTATGAGGATTTTGCTCACTACAAATCAGGAGTTTACAAACACATCACAGGTTACCAACTAGGCGGTCATGCTGTAAAGCTGATAGGGTGGGGAACAACTGATGATGGGGAAGACTATTGGGTACGCTGA 933 0.4394 MAPTLVHLATLFLALSAYYLQSAGAEEAQHLTALKLNSRILQESIAKQINENPEAGWEAAINPRFSNYTVGQFKRLLGVKPTPKKELRATPVASHPKSLKLPKNFDARTAWSQCSTIGRILGHLRAPSPLGHCGSCWAFGAVESLSDRFCIHYDVNISLSVNDLLACCGFMCGSGCDGGYPIYAWRYLKSHGVVTEECDPYFDQIGCSHPGCEPTYSTPKCVRKCVDGNLLWKKSKHYSVNAYRINSDPYDIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGYQLGGHAVKLIGWGTTDDGEDYWVR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3242 310 Pfam Peptidase family C1 propeptide 41 83 IPR012599 GO:0004197|GO:0050790
Dod01g3242 310 PANTHER CATHEPSIN B-LIKE PROTEASE 3 27 309 - -
Dod01g3242 310 CDD Peptidase_C1A_CathepsinB 102 308 - -
Dod01g3242 310 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 289 299 IPR025660 -
Dod01g3242 310 Gene3D Cysteine proteinases 30 309 - -
Dod01g3242 310 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 27 309 - -
Dod01g3242 310 SUPERFAMILY Cysteine proteinases 46 309 IPR038765 -
Dod01g3242 310 Pfam Papain family cysteine protease 102 309 IPR000668 GO:0006508|GO:0008234
Dod01g3242 310 PRINTS Papain cysteine protease (C1) family signature 291 301 IPR000668 GO:0006508|GO:0008234
Dod01g3242 310 PRINTS Papain cysteine protease (C1) family signature 130 145 IPR000668 GO:0006508|GO:0008234
Dod01g3242 310 SMART pept_c1 101 310 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3242 Dod-Chr1 73475233 73479529 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3242 K01363 - gmx:100788988 559.296