Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3241 ATGATGTCGATACCGAAGGAGCCGGAGCAGGTGATGAAGATGAGGGGAGGGGCGGTGCTTGGGAAGAAGACCATTCTCAAGAGCGACCATTTCCCCGGCTGCCAGAATAAGCGTCTCTCTCCTCAGATCGAAGGCGCTCCCAATTACCGCCAGGCTGATTCCTTGCATGTCCATGGCGTTGCTATCCCAACGATTGATGGAATCCGGAACGTTCTGAAGCACATTGGTGCCCAGAAACAAGGCAAGAAAGCACATGTTCTCTGGATCAACCTTCGTGAGGAGCCGCTTGTGTACATTAATGGCCGCCCCTTTGTTTTGCGTGAGGTCGAGAGACCGTTCTCCAACCTTGAGTATACGGGAATTAACAGGGAAAGGGTTGAACAAATGGAAGATCGGTTGAAAAAAGACATCCTGGTGGAAGCTGCTAGATATGGAAATAAAATCCTTGTGACCGATGAACTTCCGGATGGCCAGATGGTGGACCAATGGGAACCAGTATCATGTAATTCGGTGAAGACACCACTAGAGGTGTATAAGGAATTGCAAGTGGAGGGGTACCTTGTTGATTATGAACGTGTTCCTATAACTGATGAGAAAGCGCCAAAGGAACAGGATTTTGATACTTTGGTTCATAAAATTTCTCAAGCTGATGTAAATACAGAGATAATTTTTAACTGTCAAATGGGACGTGGACGAACTACCACTGGAATGGTTATTGCAACTTTGGTTTACCTCAACCGAATTGGGGCCTCTGGGATTCCAAGAAGCAATTCTATTGGTAGAATATCTCAAAGTATGACCAATGGCGCTGACCATTTGCCTAACTCAGAGGGGGCAATTCGTAGGGGAGAATATGCAGTCATAAGGAGCTTGATCCGGGTGTTAGAGGGTGGTCTTGAGGGGAAAAGACAAGTGGACAAAGTCATTGACAGGTGTGCTTCAATGCAGAACCTGCGTGAAGCAATTGCCACCTATCGCAGTAGCATTCTAAGACAACCTGATGAGATGAAAAGGGAGGCATCACTTTCTTTTTTTGTGGAGTACTTGGAGAGATACTACTTTCTAATATGTTTTGCCGTGTACATTCACTCAGAAAGGGCTGCACTCGAATCTAGTGCTGCTGGTCACAGTAATTTTGCTGAATGGATGAGAGCCAGGCCTGAACTCTACAGCATTATTCGCAGGTTGCTCAGGAGAGATCCAATGGGTGCACTTGGCTATTCCAGTTTGAAACCATCTCTAAATAAGATAGCAGAATCCACTGATGGCCGCCCTTCTGAGATGGGTGTGGTTGCTGCCTTGAGAAGTGGAGAGGTTCTTGGTAGTCAAACTGTTCTGAAAAGTGATCATTGCCCAGGGTGTCAAAATACAAGTTTGCCTGAGATAGTGGACGGGGCTCCTAACTTCCGAGAGGTTCCTGGGTTTCCAGTTTATGGTGTTGCAAATCCAACAATTGATGGTATTCGATCTGTCATTCGTAGGGTGGGTAGCTCGAAAAGTGGACGCCCAGTACTTTGGCATAATATGAGGGAAGAACCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGACCATTCAAAAACATGCTAGAGTACACGGGAATAGACCGTGAAAGAGTGGAGAAAATGGAGGCTCGATTGAAAGAAGACATCCTACGGGAAGCTAAACTCTATGACAATGCCATAATGGTTATTCATGAAACAGATGATGGGCATATATCTCATGCTTGGGAGAATGTCACCTCTGTCATGGTTCAAACCCCACTTGAAGTTTTTAAAAGCCTGGAGGCTGAAGGGTTTCCCGTTAAATATGCACGTGTTCCCATCACTGATGGAAAAGCTCCTAAAAGTTCTGACTTTGACACTCTGGCAAGTAATATTGCTTCTGCTGCAAAAGACACTGCTTTTGTTTTCAATTGTCAGATGGGCAGGGGCAGGACAACTACTGGTACTGTCATAGCTTGCCTTGTGAAACTCCGAATTGATTATAGTAGGCCCATTAAAATACTAGGTGATGATATGACCCATGAAGAATCAGATGGTGGTTCCTCAAGTGGAGATGAGGCAGGGAGTTATGTAACTGCATTAACCTCTGATACTTTACAAACAAAGACAGATGAGAGAAAAAATCGTGTTTTTGGTATAAACGACATCCTCTTGCTATGGAAGATAACAACATTATTTGATAATGGTGTTGAATGCCGAAAGGCCTTAGATGCTATTATTGATAGATGCTCTGCACTTCAAAACATTCGTCAAGCTGTTCTGAAATATAGAAAAGTATTCAATCAACAGCATGTCGAACCTAGGGTAAGGAGGGTAGCATTAAATCGTGGTGCTGAGTACCTGGAGCGGTACTTCCGTTTAATTGCTTTTGCAGCATATCTTGGAAGCGAAGCATTTGATGGGTTTTGTGGACAAGGAGAATCCAAAAGGACATTTAAGATTTGGCTGCATCATAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGGCTAAGACCGGGGCGATTTTTCACTGTCCCTGAAGAGTTGAGAACCCCACAAGAGTCCCAGCATGGAGATGCAGTGATGGAGGCTATTGTCAGGGCCCGAAATGGCTCTGTTCTGGGGAAAGGTTCCATTCTGAAAATGTATTTCTTTCCTGGTCAAAGAACTTCCAGTCACATACAAATTCATGGTGCACCACATGTTCACAAGGTTGATGAATACCCTGTATATAGCATGGCAACTCCAACCATTGCCGGTGCCAAGGAGATACTAGACTACTTGAATGCTAAGCCTAAAGCTGCCTTAACTGCCAGAAAAGTTATATTGACTGATGTGAGGGAGGAAGCAGTTGTTTATATCAATGGTACTCCCTTTGTCCTAAGGGAGTTAAACAAGCCTGTTGATGCACTCAAGTATGTGGGAATCACTGGTCCTGTGGTGGAACACATTGAAGCGCGGCTGAAAGAAGATATACTTGCTGAAATTAGACAGTCTGGTGGGCGAATGCTATTACACCGCGAAGAATATAACCCTTCAACAAATCAGTCTGATGTGGTTGGATTCTGGGAAAACATTTCAGCAGATGATGTGAAGACACCCTCAGAAGTTTATTCTTCTCTGAAAGATGATGGATATGATATTGTCTATCAGAGGATACCCTTAACACGAGAAAGAGATGCTTTAGCCTCTGACATTGATGCAATACAATACTGTAAACATGATTGTGCAGGGAGTTATCTTTTTGTATCACACACAGGTTTTGGTGGAGTTGCATATGCAATGGCCATCATCTGTATTAGACTTGACGCAGAGGCAAATTTTGCATCAGGAGTCCCACAGCCGTTGTTTGGTCCTCACATATGTGCAGTGTCTGAAGAGAACCTGCCCAGTCGAGCTTCTAACGAAACAGCACTCCGGATGGGTGACTATCGTGACATTTTGAGCCTTACAAGAGTCCTTATATGTGGTCCCCAAAGCAAAGCAGATGTTGATATCATCATTGAAAGATGTGCAGGTGCAGGGCATATTCGAGATGATATTCTTCATTACCATAAAGAATTTCAGAAGTTTACTGACGATGATGATGAGAAACGAGCATATCTTATGGACATGGGTATCAAGGCTTTGAGGAGGTATTTTTTCCTTATCACGTTCAGATCCTACCTCTACTGCACGTCTCCTGCCAATATGAAATTCGCTGCATGGATGGATGCAAGACCAGAGCTTGGTCATCTATGTAACAATCTAAGAATTGACAAATAA 3768 0.4406 MMSIPKEPEQVMKMRGGAVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTIDGIRNVLKHIGAQKQGKKAHVLWINLREEPLVYINGRPFVLREVERPFSNLEYTGINRERVEQMEDRLKKDILVEAARYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYKELQVEGYLVDYERVPITDEKAPKEQDFDTLVHKISQADVNTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRSNSIGRISQSMTNGADHLPNSEGAIRRGEYAVIRSLIRVLEGGLEGKRQVDKVIDRCASMQNLREAIATYRSSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERAALESSAAGHSNFAEWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLNKIAESTDGRPSEMGVVAALRSGEVLGSQTVLKSDHCPGCQNTSLPEIVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRVGSSKSGRPVLWHNMREEPVIYINGKPFVLREVERPFKNMLEYTGIDRERVEKMEARLKEDILREAKLYDNAIMVIHETDDGHISHAWENVTSVMVQTPLEVFKSLEAEGFPVKYARVPITDGKAPKSSDFDTLASNIASAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRIDYSRPIKILGDDMTHEESDGGSSSGDEAGSYVTALTSDTLQTKTDERKNRVFGINDILLLWKITTLFDNGVECRKALDAIIDRCSALQNIRQAVLKYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESKRTFKIWLHHRPEVQAMKWSIRLRPGRFFTVPEELRTPQESQHGDAVMEAIVRARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVHKVDEYPVYSMATPTIAGAKEILDYLNAKPKAALTARKVILTDVREEAVVYINGTPFVLRELNKPVDALKYVGITGPVVEHIEARLKEDILAEIRQSGGRMLLHREEYNPSTNQSDVVGFWENISADDVKTPSEVYSSLKDDGYDIVYQRIPLTRERDALASDIDAIQYCKHDCAGSYLFVSHTGFGGVAYAMAIICIRLDAEANFASGVPQPLFGPHICAVSEENLPSRASNETALRMGDYRDILSLTRVLICGPQSKADVDIIIERCAGAGHIRDDILHYHKEFQKFTDDDDEKRAYLMDMGIKALRRYFFLITFRSYLYCTSPANMKFAAWMDARPELGHLCNNLRIDK* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3241 1255 CDD PTP_paladin 15 312 - -
Dod01g3241 1255 Pfam Inositol hexakisphosphate 946 1101 - -
Dod01g3241 1255 Pfam Inositol hexakisphosphate 89 243 - -
Dod01g3241 1255 Pfam Inositol hexakisphosphate 507 663 - -
Dod01g3241 1255 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 865 1070 IPR029021 -
Dod01g3241 1255 PANTHER METAL ION-BINDING PROTEIN 606 1255 - -
Dod01g3241 1255 CDD PTP_paladin 435 750 - -
Dod01g3241 1255 PANTHER METAL ION-BINDING PROTEIN 1 340 - -
Dod01g3241 1255 PANTHER METAL ION-BINDING PROTEIN 480 605 - -
Dod01g3241 1255 PANTHER METAL ION-BINDING PROTEIN 344 485 - -
Dod01g3241 1255 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 248 IPR029021 -
Dod01g3241 1255 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 340 - -
Dod01g3241 1255 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 431 665 IPR029021 -
Dod01g3241 1255 SMART PTPlike_phytase_2 507 663 - -
Dod01g3241 1255 SMART PTPlike_phytase_2 89 244 - -
Dod01g3241 1255 SMART PTPlike_phytase_2 945 1103 - -
Dod01g3241 1255 Gene3D Protein tyrosine phosphatase superfamily 443 688 IPR029021 -
Dod01g3241 1255 Gene3D Protein tyrosine phosphatase superfamily 24 285 IPR029021 -
Dod01g3241 1255 Gene3D Protein tyrosine phosphatase superfamily 882 1107 IPR029021 -
Dod01g3241 1255 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 480 605 - -
Dod01g3241 1255 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 606 1255 - -
Dod01g3241 1255 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 344 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3241 Dod-Chr1 73459394 73471135 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3241 - - gmx:100788460 2233.37