Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3238 ATGGGGTGGAATGGATGTCTCAAAAGCGTGGTTTTGAGGGCTTTTATAGTAGCCTTGGTTGTTGTTCAACGTGTGGAATGCAAGGAGGGTGATTACATTGGTGGCACTGCTAGTGGTGGCTTCGTTCGGCGAAGTGGCACCAATTTCATTCTAAATGGGAAGCGTTTCTACTTCAACGGATTCAATGCGTACTGGTTAATGTATATGGCCTCTGACCCATCCACAAGACCCAAGGTCAGTACCACTTTACAACAAGCTTCCTATCATGGCTTAAGGGTTGCTAGAACTTGGGCTTTCAGTGATGGAGTTAATTACAGAGCTCTTCAAGTTTCTCCCGGTTCCTATGATGAGAAAGTATTCAGGGGACTGGACTTTGTGGTATCAGAAGCAGGAAAATATGGGGTGCGATTGATACTGAGCTTCGTGAACAACTGGAAAGATTTTGGCGGGAAAAATCGGTATGTCCAATGGGCAAGAGACCATGGTCAGAATGTGAACAACGAAGATGACTTCTTCACAAACCCAGTGGTTAAGCAATGCTACAAGAACCATATTAAGGCTGTGGTGACAAGAATAAACACAATAACTGGGGTGGCATACAAAGATGATCCTGCCATTTTTGCTTGGGAACTTATGAATGAACCTCGTTCCCAACATGACTACTCCGGCAAAGTCATTATGGAATGGGTGATCGAGATGGCTTCCTATGTCAAATCCATAGATAGCAATCACTTGCTGGAAGTAGGACTTGAAGGGTTCTATGGCGAAACAATTCCGGAAAGGAAACAATTCAATCCTGGATACCAATCAGTTGGTACTGATTTCATTTCGAGCAACCAAGTTCCCGAAATCGATTTTGCCAACATTCATCTCTACCCTGATCAATGGTTGCCAGGCTCAAACGAAGTTGCTCAGGCTGCATTTGTTGACAAATGGGTAGAAGTACATATTGAAGACTCGAAAAAAGTGCTGGGAAAGCCCATTGTTATTGGCGAGTTTAGCAAGTCTTCACGGTCACCAGGATATAGGATGGAAGAAAGGGACAGCTACATGAGAAAGATCTACAATGCCATATACAGTAGCGCTAGTAGTGGGGGACCCTGCGCCGGTGGCCTTTTTTGGCAGCTCATGGCTCAAGCAATGGATAGCTTCCGAGATGGCAACGAAATTATCTTCCAGGAGAGCCCTTCAACTACTAGTGTTATCGATCAACAATCTCGCAAGATGTCATCCATTGCTTAG 1242 0.4469 MGWNGCLKSVVLRAFIVALVVVQRVECKEGDYIGGTASGGFVRRSGTNFILNGKRFYFNGFNAYWLMYMASDPSTRPKVSTTLQQASYHGLRVARTWAFSDGVNYRALQVSPGSYDEKVFRGLDFVVSEAGKYGVRLILSFVNNWKDFGGKNRYVQWARDHGQNVNNEDDFFTNPVVKQCYKNHIKAVVTRINTITGVAYKDDPAIFAWELMNEPRSQHDYSGKVIMEWVIEMASYVKSIDSNHLLEVGLEGFYGETIPERKQFNPGYQSVGTDFISSNQVPEIDFANIHLYPDQWLPGSNEVAQAAFVDKWVEVHIEDSKKVLGKPIVIGEFSKSSRSPGYRMEERDSYMRKIYNAIYSSASSGGPCAGGLFWQLMAQAMDSFRDGNEIIFQESPSTTSVIDQQSRKMSSIA* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3238 413 PANTHER - 14 412 IPR045053 GO:0004553
Dod01g3238 413 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 14 412 - -
Dod01g3238 413 SUPERFAMILY (Trans)glycosidases 41 402 IPR017853 -
Dod01g3238 413 Gene3D Glycosidases 37 413 - -
Dod01g3238 413 Pfam Cellulase (glycosyl hydrolase family 5) 52 350 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3238 Dod-Chr1 73376382 73407341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3238 12 412 Glycoside Hydrolase AT5G66460 56.079 2.35e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3238 K19355 - gmx:100787923 656.366