Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3216 ATGAGAAGTCATATCCATGGAAGGTTTCTTTGGGGTTATCTTTGTCGTTTTCGGTCGCCGAAGCCACTCAAATCATTGCCGCAATTTCCACCATACCGGCATCGAACTCCATTTTTCGGTTTCCTTCGTTCTTACTCAGCCGAAGTGCAACCTCAACTGTCGACGGACCTATTGCATATAATGGAACAGAGACTCTCCGCTATTGAGTTCAAGACTGCTACTCTCAACAATCTTCTAAACCAGCCCGAAGTGTCACCATCAGAGTATGCAAGAGCTAATAAGGAGCTTCGGAAGCTGAGTGGCTCTTTGGACCTTATTAATGAATTGAGGGCCAAACAGAAGGAAATTGATGGCTTGAAGTCACTGGTGGCTGAATGTTCCGAAGATAAAGACATGCTTAACATGGCAACAGAGGAAATGGGCCAGGCCATAGGGGAAGAACGAAGACTGCAACATTTGCTGTTGAAGTCATTACTTCCTAAGGATGATGCTAATGAAAGGGATTGCATTTTGGAGGTGAGAGCAGGCACTGGTGGGGAGGAGGCTTCTTTGTTTGCAATGGACATATTTAAAATAAGTACTGCTCACAAGAATGGCTGGAAGTTTGAAGTAGTAGATATTGCTCAATCTGATCTTAAAGGGTACAAGGAAGCTAGTGCAGCAATTGCAGGAGTTGGTGTTTTTGGGAAACTAAAATTTGAGAGCGGAATCCATAGAGTACAGAGAGTTCCGGTGACAGAAAAGTCAGGACGTGTTCATACCAGTGCTGTTTCTGTTGCATTCCTCCCTCAGGCTGATGAGGTAGATGTTCAATTGAAGAATGAAGACTTAAAAATTGATACCTATAGATCTGGTGGTTCTGGTGGTCAGCATGCAAATACAACAAACAGTGCTGTTAGAATAACTCACATTCCAACTGGGGTTACAGTTGCTATACAAGATGAGCGTTCCCAACATATGAACAAGGCCAAAGCACTTAAAGTGCTGTGTGCAAAGCTGTATGAAATGGAAAGGTTCAGAGTTCACAGTAGTCTATCAAAACTTCGATCAGAACAGATTGGCAGTGGTGATAGATCTGAACGCATCCGAACATACAACTTTCCTCAAGGCCGTGTGACTGATCACAGAGTTGGTATCACTTATCACTCGATAGATGATGTGATGCAAGGAGAGAATCTTGATGTGTTCATTGATGCTCTTCTATTGCAAGAAGAAATGGATGCAGTTGCAACTTTTAGTTCTTCTCAGTAA 1251 0.4301 MRSHIHGRFLWGYLCRFRSPKPLKSLPQFPPYRHRTPFFGFLRSYSAEVQPQLSTDLLHIMEQRLSAIEFKTATLNNLLNQPEVSPSEYARANKELRKLSGSLDLINELRAKQKEIDGLKSLVAECSEDKDMLNMATEEMGQAIGEERRLQHLLLKSLLPKDDANERDCILEVRAGTGGEEASLFAMDIFKISTAHKNGWKFEVVDIAQSDLKGYKEASAAIAGVGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAFLPQADEVDVQLKNEDLKIDTYRSGGSGGQHANTTNSAVRITHIPTGVTVAIQDERSQHMNKAKALKVLCAKLYEMERFRVHSSLSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLDVFIDALLLQEEMDAVATFSSSQ* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3216 416 PANTHER LD18447P 43 414 - -
Dod01g3216 416 Pfam PCRF domain 71 259 IPR005139 GO:0006415
Dod01g3216 416 Gene3D - 171 397 - -
Dod01g3216 416 PANTHER LD18447P 43 414 - -
Dod01g3216 416 Gene3D - 55 163 - -
Dod01g3216 416 Pfam RF-1 domain 266 376 IPR000352 GO:0003747|GO:0006415
Dod01g3216 416 SMART PCRF_a_2 121 234 IPR005139 GO:0006415
Dod01g3216 416 Coils Coil 109 129 - -
Dod01g3216 416 Gene3D - 265 360 - -
Dod01g3216 416 SUPERFAMILY Release factor 73 404 IPR045853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3216 Dod-Chr1 73092851 73096013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3216 K02835 - gmx:100800412 643.269