Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3209 ATGGTGGAGAAGGAGAAGGAGAAGGAGGAGCAAGTAGGGTTGGGCGAATGGCGGGTGCAGCGCGGGCCTTACCTCGGAGACATATCTTCTGTTTGTTTTGTTCACCTTCCCAATCGCTCTCTTCCCGTTCTACTCGCCGGTTTGGGCTCTGAGATTCTTCTCTACGACTTGGAGCTCGCACAGATTATTATGAGATCCTTCTCTGTATTCGAAGGTATCCGCGTCCACGGAATCACCTCTAATAATTCCCCTGAGGACACGCACACTCTAATCGCTGTGTTTGGGGAAACAAGACTGAAGCTATTCAGCTTCTCCTTTGACGCCGCTTCTGGGACTGGGATCCCACACCTGACGCTGACTCACCTCTTGCCAAAGCTTCCTCACTGGGTTTTGGATGTTTGCTTCCTCAAGGGTTGCTTAGCTCATTCCCATGTGGACACCCATTTTCTTGCTATTGGATGCAGCGACAATTCGGTGCACATCTGGGATGTCCCCAACTCTAATATGCTACTCAAGGTCCAGTCGCCAGTAAGGTGCCTTTTGTACTCAATGCGATTATGGGGTCATAATCTTGAAGTTCTCCGCGTTGCATCCGGCACTATATTTAATGAGATTATTGTTTGGAAAGTGGCCCCTCGGCATGATAAATCTTCAACAAGTGGAAAAGACCATGATCATCAGAGCATTTCATTATCCAATTGCTGTCAGCTAAGAGATCAAATGTATGAAGCCATTCATGTATGTAAACTTAGTGGACATGAAGGTTCAATCTTCCGAATAACATGGTCGTCTTGTGGATCTAAACTGGTATCCGTCTCTGATGACCGTAGTGCACGTGTCTGGACTGTTCCTATTGAAAGGGAAGAGTCTTTATCACGAGATCCCACTGCCCTTGTTTTATTTGGACATAATGCTCGAGTTTGGGACTGCTGTATTGTTGATCATTTAATTATCACTGCCGGTGAGGATTGTACATGTTGTATCTGGGGAGTTGATGGTGAACAACTGCAAGTCATTAAGGAGCACATAGGAAGGGGTATATGGAGATGTTTGTATGACCCAAATTCGACACTTCTCATTACTGCTGGGTTTGACTCAGCTATCAAAGTGCATCAGCCTCAGGCTTATGTGTCTATGGGCTTGGAAGCAGCACAAAGCCCCCCTGACAGGACAGAGGTGTTTTCCATTTGCATCCCTACTGTGTTGGAACGCAATGGACTCATGGACAGCAAGAGCGAATACGTCCGTTGTTTACGTTTTGCCTCTCAGGACAGTCTTTACGTTGCTACCAATCATGGTTTTGTGTACCATGCTAAATTAAGTGGTGCGGGAGGTGCTCAGTGGAATCAACTTGTCCAGGTCAGCAATGGAGCTCAAATTATCTGTATGGATTTATTGTCTAAAGACTCATTTGAACCTGACTGTGGTGCTGAGGATTGGGTTGCTATTGGAGATGGTAAAGGTAATATGACAGTTATTGGAGTTACTAATAATGATTGTACTCCTACAGTGAGATTAAGCTTTACCTGGTCAGCTGAAATGGAGAGACAGCTCTTGGGTACCTATTGGTGCAAATCTCTGGGATGTAGATATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTATGGAGGTTGCCTGACCCTTCACAATCTAATCTTCAAAGCTACCTGAAGAGTTGTAGCATGTCACGTATAGCAGAATTCATATCGAATTATGGAATGCGGATAATGTGTTTGGATGCATGCCTGGAGGAAGAGGTCCTAGTGTGTGGAGATCTACGTGGTAATATGGTTCTATTCCCTTTGCTAAAGAATCTGGTGCTTGGCACATCAGTTATACAAGAAGTAAAGATACCAACAGTAAATCATTTCAAAGGAGTTCATGGGATTTCAAGCGTGTCTAGTGTTTCTGTTACTAAGCTTGGTTACAATCAGATTGAGATTTGCTCAACTGGAGCAGATGGTTGTATATGCTATTTGGAATATGCTAGAGATATGCATAGTTTGCAATTTACGGGGTTGAAACAAGTGAAAGAGTTGAGTTTGATTGAATATGTTTCTGTGGATAACAACTCTGTTGATACATTATCCGGCATCTATGCAGCTGGTTTTGCATCAGTAGATTTCATTGTGTGGAACTTAGTTAACGAGAGTAAGGTGGTGAGAATTCCATGTGGCGGATGGCGGCGTCCTCATTCCTATTATCTAGGTGATATACCAGAGAAGAAAAACTGCTTTGCTTTTGTCAAGGATGAAGTGATACATATCCATAGACACTGGATTCATGATAAAGACGAGAAGATATACCCTCGGAGGTTGCATATGCAGTTTCATGGGAGAGAGATACATTCCTTGTGCTTTATCTCTGAAGATATACTCCCTGGAGTTAATCATCAGGATACCTTGTTTTCTAAATCAAGTTGGGTTGCAACTGGATGTGAAGATGGAACTGTGAGATTGACTTGGTACTCTCCAGGTATTGAAAATTGGTCCACATCAAAATTGCTTGGTGAACATGTTGGAGGATCAGCTGTAAGATCAATTTGTTGTGTGTCAAAACTGCACACTTATTCATCGAGTACAACTGATGTTCCTGATCGAAATGGTGAACTGAATGCTGCTGTTGAGGACAAAGATAGTCCAACCTTACTGATATCAGTGGGTGCAAAGCGTGTATTAACTTCTTGGCTACTAAAATATCGGAAGCTGGACAGCAAAAATGACTTTCTAATTGATCATCAGTATAATTCAAAAGGAGTTGATGATCAACTTTTGTCAAGCTTGTCGTCATCAATGACATTCCAGTGGCTTTCTACTGATATGCCTGCCAAATATTCAGTTAAATATCCAGAAAATGCTTTGGAGAAATCAGCAAGTGTTGCTGAAAATGTTTCTAATACAAAGGTTGATGGTAGACCTGGATCACTGTTGTCTGAATGGGGAATGATGAACTTGATCAATGATAAACATGAGGATGACTGGAGATATCTTGCTGTCACTGCCTTTCTTGTTAAATGTGCGGGTTCCAGGATATCTGTTTGTTTTGTTGTTGTTGCTTGTTCAGATGCTACACTTGTGCTAAGGGCTTTGGTTTTGCCCTTTCGCTTATGGTTTGACGTCGCTTTGTTGGTTCCTTTGTTAGCACCTGTTCTGTCATTGCAACATATCATCTTTCCCATACGTTGGCCTCACAAAGAAAACACTCAAGCTGGAAATGTTTATGTTGTGATTAGTGGATCTACTGATGGGAGCATTGCTTTTTGGAACCTGACTGACAGTATTGAATCATTTATGCAGCGAGTTTCTGTTTGTAATGCAGAGAAGTTCTTTGATTGTCAAAAACGCCCACAATCAGGGAGAGGGAGTCAGGGTGGTAGATGGTGGAGATCTTTGAGCAGTGGCTTGTCAAAGAAAAGGCAACACAGTGGTCTGGTCACCTCAAAAGCCAAAGATGAGACTGAAAGCATTAGTTGTGCTACTCGTGGGGTCTCTTCAATGCCAAATGGTTCTGAAGACAGCAATATGGTTTATTCTCAAACCATGCAAACAGCTTCCCCTGAGTCACAGATTAAAACTGATAATTCGTCAGTGGAAGTATGTCAAATACAGCCTCTACACCTTCTGCAAAATATTCACCAATCTGGTGTCAATTGTCTCCATGTTTCAGAGATAAAAGGTGGCCAAAATACTGATAGTTGTCATGTGTACAGTATAGTTAGTGGAGGTGATGATCAAGCACTTCATCATCTTACGGTTGAACTATCAGTTAAGTCAATAAATTCAGATAGTGGGATTTTGACTTCAGACATGAGACATTTGGTCTCTGAATCCGGATATGGAAAGGACATCAATTTTCAAAGTTGGTGCAAGAATTATGGGATCACATTCTTAAATTATGTAAAAATTCCCTCGGCCCACAGCTCTTCTGTGAAAGGTGTCTGGACAGATGGATCTTGGGTGTTTTCAACTGGACTTGATCAGCGAGTCAGATGCTGGCAACTTCACGATAATAAACTAATTGAGCAAGCACATCTGATAGTTAGTGTACCAGAGCCAGAAGGGTTATCTGCTAGAGCTTGTGGCAGGAACCATTATCAGATTGCTGTTGCTGGCAGAGGGATGCAAATAGTTGACTTTTCAGGATCCTAA 4152 0.4249 MVEKEKEKEEQVGLGEWRVQRGPYLGDISSVCFVHLPNRSLPVLLAGLGSEILLYDLELAQIIMRSFSVFEGIRVHGITSNNSPEDTHTLIAVFGETRLKLFSFSFDAASGTGIPHLTLTHLLPKLPHWVLDVCFLKGCLAHSHVDTHFLAIGCSDNSVHIWDVPNSNMLLKVQSPVRCLLYSMRLWGHNLEVLRVASGTIFNEIIVWKVAPRHDKSSTSGKDHDHQSISLSNCCQLRDQMYEAIHVCKLSGHEGSIFRITWSSCGSKLVSVSDDRSARVWTVPIEREESLSRDPTALVLFGHNARVWDCCIVDHLIITAGEDCTCCIWGVDGEQLQVIKEHIGRGIWRCLYDPNSTLLITAGFDSAIKVHQPQAYVSMGLEAAQSPPDRTEVFSICIPTVLERNGLMDSKSEYVRCLRFASQDSLYVATNHGFVYHAKLSGAGGAQWNQLVQVSNGAQIICMDLLSKDSFEPDCGAEDWVAIGDGKGNMTVIGVTNNDCTPTVRLSFTWSAEMERQLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPSQSNLQSYLKSCSMSRIAEFISNYGMRIMCLDACLEEEVLVCGDLRGNMVLFPLLKNLVLGTSVIQEVKIPTVNHFKGVHGISSVSSVSVTKLGYNQIEICSTGADGCICYLEYARDMHSLQFTGLKQVKELSLIEYVSVDNNSVDTLSGIYAAGFASVDFIVWNLVNESKVVRIPCGGWRRPHSYYLGDIPEKKNCFAFVKDEVIHIHRHWIHDKDEKIYPRRLHMQFHGREIHSLCFISEDILPGVNHQDTLFSKSSWVATGCEDGTVRLTWYSPGIENWSTSKLLGEHVGGSAVRSICCVSKLHTYSSSTTDVPDRNGELNAAVEDKDSPTLLISVGAKRVLTSWLLKYRKLDSKNDFLIDHQYNSKGVDDQLLSSLSSSMTFQWLSTDMPAKYSVKYPENALEKSASVAENVSNTKVDGRPGSLLSEWGMMNLINDKHEDDWRYLAVTAFLVKCAGSRISVCFVVVACSDATLVLRALVLPFRLWFDVALLVPLLAPVLSLQHIIFPIRWPHKENTQAGNVYVVISGSTDGSIAFWNLTDSIESFMQRVSVCNAEKFFDCQKRPQSGRGSQGGRWWRSLSSGLSKKRQHSGLVTSKAKDETESISCATRGVSSMPNGSEDSNMVYSQTMQTASPESQIKTDNSSVEVCQIQPLHLLQNIHQSGVNCLHVSEIKGGQNTDSCHVYSIVSGGDDQALHHLTVELSVKSINSDSGILTSDMRHLVSESGYGKDINFQSWCKNYGITFLNYVKIPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWQLHDNKLIEQAHLIVSVPEPEGLSARACGRNHYQIAVAGRGMQIVDFSGS* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3209 1383 Gene3D - 239 315 IPR015943 GO:0005515
Dod01g3209 1383 SUPERFAMILY WD40 repeat-like 23 229 IPR036322 GO:0005515
Dod01g3209 1383 SUPERFAMILY WD40 repeat-like 1076 1342 IPR036322 GO:0005515
Dod01g3209 1383 PANTHER WD REPEAT PROTEIN 21 1382 - -
Dod01g3209 1383 MobiDBLite consensus disorder prediction 1134 1175 - -
Dod01g3209 1383 SUPERFAMILY WD40 repeat-like 140 546 IPR036322 GO:0005515
Dod01g3209 1383 SMART WD40_4 112 163 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 332 372 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 503 545 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 243 282 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 1297 1334 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 770 823 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 1047 1090 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 1202 1252 IPR001680 GO:0005515
Dod01g3209 1383 SMART WD40_4 293 330 IPR001680 GO:0005515
Dod01g3209 1383 Gene3D - 17 238 IPR015943 GO:0005515
Dod01g3209 1383 Gene3D - 316 606 IPR015943 GO:0005515
Dod01g3209 1383 Pfam WD domain, G-beta repeat 248 281 IPR001680 GO:0005515
Dod01g3209 1383 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 250 283 - -
Dod01g3209 1383 MobiDBLite consensus disorder prediction 1150 1175 - -
Dod01g3209 1383 SUPERFAMILY WD40 repeat-like 529 853 IPR036322 GO:0005515
Dod01g3209 1383 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 283 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3209 K24737 - gmx:100780968 2134.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3209 01 73007939 73021544 Dod01g3209 01 73007939 73021544 ECH