Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3206 ATGGTGAGTTGTGGCCGTTTCTACTGCGTTCGACACTTGAGAGGTGGCCATGGAGAAGAGTCTATGCTTCCTTATAGAGAACGGAATGTGATAACTTCTTGTGATTCAGAAATAATAAGTGTATTGATACACTCTAATATTGAGACTATTAATCAATTTGGTGTATGGTACACCCACAATTACCTAGTGCACCGCAAGGAGACAGTGCATGAGGTGGCGCGGCACACCCTGTTGGCTAACGGCGACGAGCGTGCAATGGCACTAAGCAAAGGCGAGATGCAAAGTGACAGCAGAGGCACTTCGTGCTGCAGCTGTTCACTGTGGCTGGGAAATTCTGATGGTGGTTTGGTCATGAGACAATTGATTTTCTGGCTTGAGTTTGTAACATATGAAGGCTTCGGGAAGAACTCACCCCTCAAACAAGGAGTTCACTCACTGCCAATGCCGAATCAAAGATTGGAGGGTAAGGTGGCTCTTATCACTGGGGCAGCTAGTTGGATTGGTGAAGAGACAGTGAGACTATTTGCTGTAAACGGAGCCTATATTGTTGCCGCTGACATTCAAGATGACCTTGGTCACCAAGTTGCAGCTTCAATAGGCTCAGATAAAGTCACTTACCACCATTGGGATGTGAAAGATGAGAGCCAAGTTGAAGAAATGATTAATTTCACACTGGAAAAACATGATCGCATTGACATCCTTTTCAGTAATGCTGGGATACTATGCTCTAAATCCGGGATCCATGACCTTGATCTGAATGAATTTGACAACATCATGGCCACAAATGTTCGTGGTGCGGCTGCCACAATCAAGCACGCTGCACGTGCCATGGTTGCTAAGGGCACCCGTGGATCCATCATATGCACCACAAGTGTCGCTGCTACTATTGGTGGAACTAGTCCTCATTGCTACACGGCTTCAAAGCATGCTCTAGTGGGGCTTGTGAAATCAGCTTGTAGTGAGCTTGGGGCTTATGGGATCAGAGTCAATCGTGTCCCCTTATGCAGTTGCCACACCTCTTTTGAAGCTATTGGTCATGCACAGGCTAATCTGAAGGGGATCGTGTTGAAGGCTCGGCATATTGCAGAAGCCGCTATGTATCTTGCTTCTGATGAGGCTCTTTACATCAGTGGTCACAACTTGGTAGTTGATGGTGGCTTCTCCGTGGTTTATCGTGCTCAATCTGCGACACCTGTGTAA 1200 0.4683 MVSCGRFYCVRHLRGGHGEESMLPYRERNVITSCDSEIISVLIHSNIETINQFGVWYTHNYLVHRKETVHEVARHTLLANGDERAMALSKGEMQSDSRGTSCCSCSLWLGNSDGGLVMRQLIFWLEFVTYEGFGKNSPLKQGVHSLPMPNQRLEGKVALITGAASWIGEETVRLFAVNGAYIVAADIQDDLGHQVAASIGSDKVTYHHWDVKDESQVEEMINFTLEKHDRIDILFSNAGILCSKSGIHDLDLNEFDNIMATNVRGAAATIKHAARAMVAKGTRGSIICTTSVAATIGGTSPHCYTASKHALVGLVKSACSELGAYGIRVNRVPLCSCHTSFEAIGHAQANLKGIVLKARHIAEAAMYLASDEALYISGHNLVVDGGFSVVYRAQSATPV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3206 399 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 284 292 IPR002347 -
Dod01g3206 399 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 229 240 IPR002347 -
Dod01g3206 399 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 304 323 IPR002347 -
Dod01g3206 399 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 150 395 - -
Dod01g3206 399 PRINTS Glucose/ribitol dehydrogenase family signature 351 371 IPR002347 -
Dod01g3206 399 PRINTS Glucose/ribitol dehydrogenase family signature 278 294 IPR002347 -
Dod01g3206 399 PRINTS Glucose/ribitol dehydrogenase family signature 157 174 IPR002347 -
Dod01g3206 399 PRINTS Glucose/ribitol dehydrogenase family signature 229 240 IPR002347 -
Dod01g3206 399 PRINTS Glucose/ribitol dehydrogenase family signature 304 323 IPR002347 -
Dod01g3206 399 PRINTS Glucose/ribitol dehydrogenase family signature 325 342 IPR002347 -
Dod01g3206 399 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 150 395 - -
Dod01g3206 399 Gene3D - 145 394 - -
Dod01g3206 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 390 IPR036291 -
Dod01g3206 399 Pfam Enoyl-(Acyl carrier protein) reductase 162 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3206 Dod-Chr1 72983336 72985995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3206 141 389 Acyl Lipid Metabolism Gene Families AT3G55290 28.464 7.44e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3206 - - gmx:100811279 370.548